KEGG   Cryptosporidium parvum: cgd3_1920
Entry
cgd3_1920         CDS       T00168                                 
Name
(RefSeq) possible PRP38 pre-mRNA splicing factor family member
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    cgd3_1920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpv03041]
    cgd3_1920
Spliceosome [BR:cpv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    cgd3_1920
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    cgd3_1920
SSDB
Motif
Pfam: PRP38 HIND Collar
Other DBs
NCBI-GeneID: 3374148
NCBI-ProteinID: XP_626763
ApiDB_CryptoDB: cgd3_1920
UniProt: Q5CUQ1
Position
3:complement(512817..513602)
AA seq 261 aa
MRNEQNSHHKLFSVSSILRDRVFSSIYWKGECFALDSETILDKAVLLDYIGTTYGGDRKA
TPFLCLLVKLLQIRPSTEIVLEYINNPRFKYLTALGIVYLRLTESSIVIHKSIEHLYQDY
RRIRIRNLDGSFDIIHLDELVEICLCEKKFLDLDFPYIHKRAVLVKQGHLKFPRKSMLEY
VPSNSGGSSPISKTENESNIKRRKSFSRSPSVSSIEGNNTQNPGKEKARKTSIYSSKNEL
SLSVEQWNVYRKKLGLKPLQE
NT seq 786 nt   +upstreamnt  +downstreamnt
atgagaaatgagcaaaacagccaccataagttgttttcagttagttcaatccttagagat
cgtgtgttctcaagcatttattggaaaggagaatgttttgccttagacagtgaaacaatt
ctggataaggctgttttgttggattatattggaacgacttatggtggtgatagaaaggca
actccatttctatgcttattagtaaagcttttgcaaattaggcctagtacagaaatcgtc
ttagagtatattaacaacccaaggttcaaatatttgactgcattgggaatagtgtatctt
agactcactgaatcttctattgttatacacaagtctattgagcatttgtaccaagactat
agaaggattcggattcgaaatttggatggatcttttgatattatacacttagatgagcta
gttgaaatttgtctctgcgaaaaaaagttcctagatttggactttccttatattcataaa
agagcagtcttggtaaagcaaggtcatttgaagtttccaagaaaatcaatgcttgaatat
gtcccttctaacagtgggggttcttccccaatttccaaaacagaaaatgaatctaatata
aagcgaagaaaatcattctcaagatctccctctgtatcatctatagaaggtaataatact
caaaatccaggaaaggaaaaagccagaaaaacttctatctattcttccaaaaatgagtta
agcttatctgttgaacagtggaatgtttatagaaagaaactaggccttaagccactacaa
gagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system