KEGG   Cryptosporidium parvum: cgd7_2790
Entry
cgd7_2790         CDS       T00168                                 
Name
(RefSeq) regena domain protein (CCR-Not complex protein subunit 3)
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    cgd7_2790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpv03019]
    cgd7_2790
Messenger RNA biogenesis [BR:cpv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     cgd7_2790
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     cgd7_2790
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 3372265
NCBI-ProteinID: XP_628448
ApiDB_CryptoDB: cgd7_2790
UniProt: Q5CYD2
Position
7:complement(667071..668255)
AA seq 394 aa
MADSELNLICSIFSKCESDLKAIVSIVNILSKNKYEVNKFETEIREIKEKLHIVEKKIVE
SRIVSSNQTDFVSEKYILEKCHESLQSLKGSIVNFKEIKMNNDHSQGDKKLQINDFESKS
VGDLLNDEFSELRIDNEVKLSQINADNYIKDSFSPEKLNENDIYTRERIVKPGNNTEIPI
ENTDEYKHSIGFRMDVSKHLNTDILDNSFNNKLEIQDSIGRHIQYTPRMVWHNPRSDFPS
RPLEKLANTSFFDKLALDTLFFIFYFQQGTFQQFLSIQELKRKKWQFHKKCFAWFYKRSD
SKITTEDAEVADYIYFDFEKDWCQKIKNDFAFEYIHLDDTPIVINKNNESNACYNSKACA
DKDQISFNSDISENIFNADGAINDHCTINNPSNK
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcagatagcgaattaaatctgatatgctcaattttttcaaaatgtgaaagcgattta
aaagctatagtgtctattgtaaatattttatcaaaaaataaatatgaagttaataagttc
gaaacagaaatcagagaaattaaagaaaagttgcatattgtagagaagaaaatagtagaa
agtagaattgtgtcatctaatcaaacggatttcgtttctgagaagtatattttggaaaag
tgtcatgagtcactacagtctctaaagggatctattgttaactttaaagaaataaaaatg
aataatgatcattcacaaggggacaaaaaattgcaaataaatgatttcgaatcaaagtct
gtaggcgatcttttaaatgacgaattttctgaactaagaattgataatgaagttaaactt
agccaaattaatgccgataattatattaaggatagtttcagtccagaaaaacttaatgaa
aacgatatttacactagggagagaattgttaaacctggaaataatacagagataccgatt
gaaaatacggatgaatataagcattcgataggatttcgtatggatgtatctaaacattta
aatacagatattctagataattcatttaataacaaactagagatacaggattcaattggc
aggcatattcaatatactccaagaatggtttggcataatccaagatctgattttccttct
agaccacttgaaaagttggctaacacttcgttttttgataagttggctttggacacttta
ttttttattttttattttcaacaagggacatttcaacagttcttatcaattcaagagctt
aaaagaaaaaaatggcaatttcataaaaaatgttttgcttggttttataaaagatctgat
tcaaaaattactacagaagatgccgaagttgcagactatatatattttgattttgagaaa
gattggtgccaaaagataaaaaatgactttgcatttgaatatattcacctggatgataca
cctattgttattaacaaaaataatgagtctaatgcttgctacaacagcaaggcttgtgct
gacaaagatcaaataagttttaattcagatatttctgaaaatattttcaatgctgatggc
gcaattaatgatcattgcacaattaataacccttcaaataaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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