KEGG   Cryptosporidium parvum: cgd8_900
Entry
cgd8_900          CDS       T00168                                 
Name
(RefSeq) Ydr449cp/Utp6p; small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA). HAT repeats
  KO
K14557  U3 small nucleolar RNA-associated protein 6
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    cgd8_900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpv03009]
    cgd8_900
Ribosome biogenesis [BR:cpv03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    cgd8_900
SSDB
Motif
Pfam: U3_assoc_6
Other DBs
NCBI-GeneID: 3374418
NCBI-ProteinID: XP_626998
ApiDB_CryptoDB: cgd8_900
UniProt: Q5CWC1
Position
8:247061..249973
AA seq 970 aa
MADKVQRVMEDMVPELLDLGKRKVFSKEEIREIIKHRRNFEYKIASRTPILRDFLEYLSH
EYELERIRNTRTKALKLKKRTIGDYSIIRLIHFIFKRALRKFPSDEKLWLQNIDFCLKSG
SSKALQRSLISALKHNPNNSVFWLIMSDRELQNGNSKEARSAILLGLRVNKSSLILWRGF
SQLETNIAYRKYLDSFSSSKLALNKGFQIKNSSVMPLIPILNHGLRRIKLEYKKEAHIIF
MFRQYYKLYNTLLKDGDLSRIEGMDELKNQIFDSFNQSKKLQPLFPVFGIILGISKNDQS
DIFSHFKYEIDQLFSNSDSEFVLVSLIFICRLIYNCINGQFPVSSPGNQSNMDTSFETIN
NSNIIDFGFQISESIQDFDNNQELSNQNDSTMENDLNLDMITWYSQTCLKNLIFKENLQI
KKTIHLLKLDPNFWNCCFLEDSNVEDLIQILSLYSIPSIVDREVWKEKLFSKEQIESIRE
KIMLYLSQDLNKDRFVQLVTDIKGTIEKLAIEPEFQDLKLTLFEALDSLFESNHVDNFNN
YTNDDKHIRDSPNQNLPQIPDNIPQLIQAYKQFIIYYGTKQLSPNQATFMIQSINKLLDL
IQNQVENDEKQSESLDFIGFSKSIFWTLYIISTNSQELNEEYSQSLLKLRQRIIFFSLNI
LPRWISTRKIPGLLFNTLIIYSVLKSTENMDNSLSSLIIKYLKYQENGMEINFDSSSIIG
ILKESINEDYLTHATEILLELPSEYSWLLSNDITMMSKANKDITSITFMLSCITLLYLLL
ERYLEKCISRKNSHNKLSDPNLENPNNYLIPKLFWMLNHLITYINGLDDFKSEEFKINLY
VRYLLLIKLIEHFKVKRILSPKFGEFNNGNQIPTFSMLISQFNKCSSQMRSGKIPSGLSI
VTISTLPLDDPQFELFLKRTSSIQEDGQEVFETPESQNSPHQTLNKVMQNILNPCQLLAP
TSIYVNTNYL
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggcagataaggtacaaagagtgatggaggacatggttccagagctcttggaccttgga
aaacgtaaagttttttcaaaagaggaaatcagagaaattatcaagcatagaaggaacttt
gaatataaaatagcttcaagaactccaattttgagagattttttagaatatttaagtcat
gaatatgaacttgagagaattagaaatactagaacaaaagcattaaagttaaaaaaacgt
actattggtgattactcaattattcgtttaatccactttattttcaaaagagctctcaga
aagtttccatctgatgaaaagttatggcttcaaaacattgacttttgtttaaaatcagga
tcttcaaaggctcttcaaagaagtttaatttctgctctcaaacataacccaaataatagt
gttttttggcttataatgtctgatagagagctacaaaatggaaattcaaaagaagctagg
tctgcaattcttttgggattgagagtaaacaagagttctctaatactatggagaggtttt
tctcaacttgaaactaacattgcatatagaaagtatttagactctttttccagctctaaa
cttgcgcttaataaaggattccaaattaaaaattccagtgttatgcctctaattccaatc
ttaaaccatggcctgagaagaatcaagcttgaatataagaaagaagcccatattatattt
atgttcaggcaatattacaagctttataatacacttttgaaggatggtgatttatctagg
attgaaggtatggacgagctaaaaaatcaaatatttgactcatttaatcaaagcaagaaa
ttacaaccattatttccagtatttggaattattttaggcatttccaaaaatgaccaatcg
gatatattcagtcattttaaatatgaaattgaccaactatttagtaattcagatagtgag
tttgtcttggtttctttgatctttatttgcagactcatttataactgcattaatggccaa
tttcctgtatctagtccaggaaatcagtcaaatatggatacctcatttgaaaccataaat
aattctaatattatagattttggatttcaaatttctgagtccattcaagattttgataat
aatcaagaactttctaatcaaaatgattctacaatggagaatgatttaaatttagatatg
attacttggtactctcagacttgtttgaaaaatttgatattcaaagaaaatttacaaatc
aagaaaactattcatttattgaaacttgatcctaacttttggaattgttgttttttagaa
gattctaatgttgaagatcttattcaaatactttcattatactcgatacctagtattgtg
gatagagaagtatggaaggaaaaattattttcaaaagagcaaattgaatctattagagaa
aaaattatgttatacttatctcaggatttaaataaggacagatttgtacaattagtcact
gatataaagggtaccattgaaaaattggctattgaacctgaatttcaagatttaaaactt
actctgtttgaggctcttgactcgttatttgagtccaaccatgtagacaattttaataac
tatactaatgatgacaaacatataagagattctccaaatcagaatttaccccaaatcccg
gataatattcctcaattgatacaagcatataaacaattcattatatattatggtacaaaa
caactttcacctaatcaggctacattcatgatacaatccattaacaagctgttagatcta
atccaaaaccaagttgaaaacgatgaaaaacagtctgaaagtttggattttattggattt
tcaaaatcaatcttctggactttatatatcataagcaccaattcacaagaattaaatgaa
gaatattcacaaagtcttctcaaacttagacaaagaatcatctttttctcacttaatatt
ttaccaagatggatttctactagaaaaattccagggctcctattcaatacattaattatt
tactctgtacttaaatctacagagaatatggataattcattatcaagtctaataatcaaa
tacttaaaataccaagagaatggtatggaaattaattttgattcatcatctattattggt
attcttaaagaatctatcaatgaagactatcttactcatgctactgaaattcttcttgaa
ttaccatctgaatatagctggttactttccaatgatattaccatgatgtctaaagccaat
aaagatattacatcaattacattcatgctttcttgtataactttactatacttactactt
gaaagatatctagaaaagtgtatttcacgaaaaaacagtcacaataaactcagtgatccg
aatctagaaaatccaaataattatctaatacctaaactattttggatgttgaaccatcta
attacttatattaatggccttgatgactttaagtccgaagaattcaaaataaatttgtac
gtaagatatttacttctcattaaacttatagaacatttcaaggtaaaaagaattctttct
ccgaaatttggagaatttaataacggtaaccagatacctactttttcaatgctaattagt
cagtttaataaatgctcttcacaaatgcgttctggcaaaataccttctgggcttagcatt
gtaactatctctactttacccttagatgatcctcagttcgagctattcctaaaaagaaca
tccagcatacaagaagatggccaagaagtctttgaaacccctgaatctcaaaacagtccc
catcaaactttaaataaagtcatgcaaaatattttaaatccatgccaacttttggcgcca
acatctatatatgtaaatactaattatttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (91)   
   KEGG ORTHOLOGY (1)   
   RefGene (86)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (99)   

Download RDF
DBGET integrated database retrieval system