KEGG   Capsella rubella (pink shepherd's-purse): 17878501
Entry
17878501          CDS       T02984                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1
  KO
K01309  ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:3.4.19.12]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crb04121]
    17878501
Enzymes [BR:crb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     17878501
Ubiquitin system [BR:crb04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    17878501
SSDB
Motif
Pfam: MINDY_DUB
Other DBs
NCBI-GeneID: 17878501
NCBI-ProteinID: XP_006283608
UniProt: R0F541
Position
Unknown
AA seq 440 aa
MAIDYSPPSSESDSDSSAEETTQTNQEWQLKEAAKKKESPKVVFYKTKEIEYRSMTKRII
LQDENGPCALISICNVLILRGEITLDLDCFEVSEQTLLNRVGEVLVERKDYDECIDLELV
DGLAEGIIVDVKFKSIKDFVFTPKLAIFDSLDIPLYHGWLVDPEDVEIATAIGGRSYDAL
LNELTALDTQTVKAPNSKENGRLRKGDIEEEEALFKALTLSDREVSGVDTHRDSNERKAV
SDSSGENGLTRKDGEVINGFLKDNASQLTWHGLFTLEDTLKEDELCVFYRNNHFSTMLKR
DDKLFTLVTDQGYLGEQDLVWERLSQINGDSVFITGNFKVFKRDSGENRKWGQKHAIKKS
ENVFCGINSEDMDNTDPDLQMAWELQRQVWAGETGSEVPVITIRELREHISSSIRELREL
FDVESQEVRWEHRERWNQFC
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcgatcgattactctcctccttcttcggaatcggactcggattcttccgccgaagag
acgacgcagactaatcaggaatggcaactgaaagaggcggcgaagaagaaagaatctccc
aaagttgtcttttacaagacgaaggagatcgagtaccgttcaatgacgaagcgtatcatt
ctccaagacgagaacggaccatgtgctctcatctccatttgtaatgttcttatcttgaga
ggcgaaatcactctagatcttgactgttttgaagtatctgaacagactttgctgaatcgt
gtgggtgaagtactggttgaaaggaaagattatgatgagtgcattgatcttgagctcgtc
gatggccttgcagagggaataattgtcgatgtaaaattcaagagcattaaggattttgtg
tttacacctaagctagctatatttgattcacttgacattcccttgtatcatggatggcta
gttgatcccgaggatgtggaaatcgctactgcaattggaggcagatcgtacgatgcatta
ttgaatgagcttactgccttggatacacagactgttaaggctccaaacagtaaagagaat
ggtagattgagaaagggagatattgaagaagaagaagcgttgtttaaagccttgacatta
tctgatagggaagtgtctggtgttgatactcacagagactcaaacgaaagaaaggctgtg
tctgattcctcaggagaaaatgggctcacgcgaaaagacggtgaagtgatcaacggattc
ttgaaagataatgccagtcaattaacttggcacgggctctttaccttggaagatactctt
aaagaagatgaactttgtgttttctaccgcaacaatcacttctctaccatgctgaagcgt
gacgataaactctttactttggttactgatcaaggctatctgggggagcaagacttggtt
tgggagagattaagccagattaatggcgattctgtcttcattactggtaacttcaaggtc
ttcaagagggacagtggcgaaaaccgaaaatggggtcaaaagcacgcaattaaaaaatct
gagaatgttttctgcggaatcaacagtgaagacatggataatactgatcccgatcttcaa
atggcgtgggagttgcagcgacaagtctgggctggagagactggatcagaggtaccagta
ataaccatcagagaactcagagaacacatttcttcttcaatacgagaactcagagagctt
tttgatgtggaatcacaagaagtgaggtgggaacacagagagaggtggaatcagttctgt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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