KEGG   Capsella rubella (pink shepherd's-purse): 17889499
Entry
17889499          CDS       T02984                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
  KO
K14806  ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:crb01009]
    17889499
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crb03009]
    17889499
Enzymes [BR:crb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     17889499
Protein phosphatases and associated proteins [BR:crb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     17889499
Ribosome biogenesis [BR:crb03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    17889499
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 17889499
NCBI-ProteinID: XP_006295405
UniProt: R0HW22
Position
Unknown
AA seq 611 aa
MMKRTQQSARESKQEAKDGSKGKSGLFASCSFSSLGLDPKLSDQLQERMGFEAPTLVQAQ
AIPVILSGRDVLVNAATGTGKTIAYLAPLIHHLQGYSPKVDRSHGTFALVIVPTRELCLQ
VYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHK
NLRWVIFDEADCILELGYGKEIEQIIKLLGSGQNEEGEEDNIVPKGVQKQNLLLSATLNE
KVNHLAKLSLDDPVMIGLDNSKLQQNLSVESPASPNSDGDDMVIHVNKSVNPSSEDYGIP
SQLVQKYVRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSELQWPPN
SGKEEEGTKQLFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQALLLSTDVAARGLDFPKVR
CIIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLLKV
LDKFPIPGNMPRIKKVISLESHPWVISLQRALESVTYSEPKMKNLAKNAFVSWVRGYAAH
KGELKSIFVVKKLHLGHVAKSFALREQPSLVGKSHHKESMKRKRDERQKGQQAKKRKNMS
GSGGRSTQKTR
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgatgaagagaacccaacaatccgcaagagaatcaaagcaagaagctaaagatggaagc
aaaggaaagagcggtttgtttgcttcatgttccttctcttcccttggcttagatcccaag
ctctctgaccagctccaagaaaggatgggatttgaagctcctacacttgtacaagctcaa
gcaattcctgttattctctctggtcgagatgtacttgttaatgctgcaaccggtactgga
aagactatagcgtatttggcaccactcatccatcacttgcagggctattctcccaaggtt
gatcgttctcatggaacttttgctttggtgattgtgcccacacgggaactgtgccttcag
gtgtatgaaactttggagaagctgctgcatcggttccattggattgtccctggctatgtg
atgggaggagagaaaaaggctaaagaaaaggctaggttaaggaaagggatatccattcta
attgcaacccctggacgtcttcttgaccatttgaagaacacagcttcattcgtgcacaaa
aatctgcgttgggttatctttgatgaagcggattgcattctcgaattaggctatgggaag
gagatagaacagattattaagcttctaggttctgggcaaaacgaagaaggggaagaggat
aatattgttcctaaaggtgttcagaagcagaacttgttattgtcagcaacattgaatgaa
aaagttaaccaccttgcaaaacttagtttggatgatccggtaatgattggtcttgacaac
agcaaattgcaacaaaatctgtctgtggagtcccctgcctctcctaactctgatggggat
gatatggtaattcatgtaaacaaatccgtaaacccttcatctgaggactatggcataccg
tcacagctagtgcagaaatatgttagagtgccatgtggtgcaaggcttgtggcacttctt
tctgttctcaagaacctttttgaaagagaagcttctcaaaaggtagtcgtattcttttcg
acacgtgatgctgtagattttcattactcacttctgagtgaactccaatggccaccaaat
tctgggaaagaagaggaggggactaaacagttgtttcttaagtgcaaaacgtttcggtta
catggaagtatggagcaagaggatagaagatctgcgtttgggacctttaaaactgagaaa
caggctcttctcttgagtacagatgttgctgctaggggtttggatttccctaaagtaaga
tgtattatacagtatgactgtccgggagaagctaccgagtatgtgcatagagtgggtaga
acagctcgtattggtgaaaaaggagaagcgttgttatttctacagccaattgaaatagac
tatcttaaggagcttaagaaacacggtgcatcacttacagagtaccctcttctaaaagta
cttgataaatttcccatacccggcaatatgccccgcatcaaaaaggtcatatccctagaa
tcgcatccttgggttatatcactgcagagagctcttgaatccgttacttactccgagcca
aagatgaagaacctggcaaagaatgcatttgtctcttgggtaaggggatatgcagctcac
aagggagagctcaaaagcattttcgtggtaaagaagcttcacttgggtcatgtcgccaag
agctttgctctgagagagcaaccgtctttagttgggaaatcacatcataaagaatcgatg
aagaggaagagagacgaacgccaaaaaggacaacaagctaagaagagaaagaatatgagc
ggcagtggcggtagaagtacacaaaaaactagataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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