KEGG T03920: 105327093

Crassostrea gigas (Pacific oyster): 105327093

Entry

105327093         CDS       T03920

Name

(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1

K04955

hyperpolarization activated cyclic nucleotide-gated potassium channel 2

Organism

crg Crassostrea gigas (Pacific oyster)

Brite

KEGG Orthology (KO) [BR:crg00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:crg04040]
    105327093
Ion channels [BR:crg04040]
Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   105327093

SSDB

Motif

Pfam:

Ion_trans_N Ion_trans cNMP_binding Ion_trans_2 Osw5

Other DBs

NCBI-GeneID:

105327093

NCBI-ProteinID:

XP_034326541

Position

LG3:complement(22325572..22384869)

AA seq 1059 aa
MYIRCEIGDSPKSELSSSQLKVPPARSVSMSSLRNPSGHPLINISEYDRPVSYSSDEESS
NPTSPYHQARNQQGALSDRSKESENEELLSENESEFQLHVEHVATLSPKPTRSDSVKLKR
QSNGRQYRKNSQPIGSATPPKPARRSASLKLKRMHLDVNNQSKERTMPCLPKCSNRPTNP
SITITIESDDDSIYSDYLNPDVNYKNEINRVHFVGDETSLYGTPREELLPPTGDTASNDL
YNNKSSPTSFLKEQIISFFQPSDNKLAMKLFGNKNSLQREKMRHKRVGNWVIHPCSNFRF
YWDLFMLVLLLANLIILPVAISFFNNDLSEEWIAFNCISDTVFFLDIIINFRTGIILNDF
ADEIILDPKLIAKHYVKSWFFLDLISTIPMDYIFLWWDAEADFYQMVHAGTGLRVDAGSY
WQGRALRILRLAKLLSLLRLLRLSRLVRYVQQWEELLKSKKFDANPCMTKCGRRRRPGFL
AVAGKFMRIFNLICLMLLLGHWNGCLQFLVPMLEDFPRDCWVSIEELKNASWWTQYTWAL
FKALSHMLCIGYGRFPPQNMTDTWLTILSMLSGATCYALFLGHTTTIIQSFDTSRRLYNE
KFKQVEEYMIYRKLPRKLRQKISEYYEHRYQGKMFDEDNILDELNEVLRQEVINHNCRAL
VKSVPFFTNADPQFVSAVISKLEFEVFQPGDYVIREGTMGNKMYFIQEGIVDIITKDNEI
ATSLSDGSYFGEICLLTNAKRVASVRAETYVNLYSLSVQHFNSVLERYPLMRRTMESVAA
ERLTKIGKNPSIVSSRADLEEDQKLVNEIVMESTPVVTSASEDEDKDSDDSSESSKSSRR
KKKFKFDFTGKLQKITEERKSKSRESLHKDSLDMPNGKMEKLRKMPSGSNLFGLRVGFAG
FSDRKRSESVGANLNSIEHHSGSGQSGQSYLPRRASFLGTKFFKPKEPKKEKKERTRSTG
GNDSPSSDGKGGVIQFLTVPLQADLRHKLKGKKSKSEHSVSQKEPPTNMHSQDIIEESPL
NVQSGSDSIPETVVHQTDRAKECVYQIEDIDESSPSSHL

NT seq 3180 nt +upstreamnt +downstreamnt
atgtacataaggtgtgaaataggagattcaccaaaatcagagctgtcttcttctcagttg
aaggtgcctccggcacgttccgtcagcatgtcgagtcttcggaacccctctggacatccc
ctaataaacatttcagaatacgacagacctgtgtcgtacagttcggacgaggagtccagt
aacccgacatcgccctatcaccaggcacggaatcagcaaggtgcgctaagcgatcgatca
aaggagtcggagaacgaagagctgctctcagagaacgaatcggagttccagcttcacgta
gagcatgtggccacgctctcgcccaaacctaccagatcggattctgtaaaattgaagagg
cagtctaatggaagacaataccggaaaaattctcaaccaataggaagtgctacgccacct
aagccggcccgaaggagcgcgagtttgaagctcaaacgtatgcacctggatgtaaacaat
cagtcgaaagagcggacgatgccttgcctacccaaatgcagtaaccgaccaacgaatcca
tccatcacaataaccattgaatcagacgatgattctatctacagtgattatttgaatcct
gatgttaattacaagaatgagataaaccgtgttcactttgttggggatgagacctcgctg
tatgggactcccagagaggaactgttgccccctactggcgacacggcctccaatgacctg
tacaacaacaagtccagtccgaccagcttcctcaaggagcagatcatttctttttttcaa
ccgtcggataataaacttgcaatgaagttgtttgggaataaaaactctctacagagggag
aagatgagacacaagcgggtggggaactgggtgatacatccctgtagcaatttcaggttt
tattgggacttgttcatgttagtccttttactagccaaccttatcatcttaccagtagcc
atatcgttcttcaacaatgatctctcggaggaatggatagcattcaactgtatatccgat
accgtgttctttttggatattataatcaacttccggacaggtataattctaaatgatttt
gccgacgagattattttggaccctaaattgattgccaaacattatgtcaagtcttggttt
ttcctcgacttaatcagcacaataccaatggactatatctttctttggtgggacgcagaa
gccgacttttatcaaatggtccatgcaggtacgggtttgcgagtggatgcaggctcatac
tggcaagggcgagccttacgaattctacgtctagccaaactcctgagtctccttaggctg
ctgcggctgtcgcgactggttcgctatgttcagcaatgggaggagctgttaaaatctaag
aagtttgacgcaaacccttgtatgactaagtgtggacgacgcaggcgcccggggttcctt
gctgtggctggaaagttcatgcggatatttaatttgatatgtctgatgttactcctcggt
cactggaacggttgtctacagtttctggttcccatgttagaggactttccaagagattgt
tgggtttctattgaagaacttaagaatgcttcatggtggactcagtatacgtgggctttg
ttcaaagctctgtcacatatgctttgcatagggtatggtcgtttcccgccacaaaatatg
acagacacgtggcttacaattttgagcatgctcagtggtgctacatgctacgcgcttttc
cttggacacactacaacgataattcaatcttttgatacatcacgaagactttataacgag
aagttcaaacaagtcgaagaatacatgatatacagaaagcttccgagaaaactgcgacag
aaaatatctgaatactatgaacaccgttaccaaggcaaaatgtttgacgaagacaacata
ctggacgaattaaacgaggttttaagacaggaggtgatcaaccacaactgtcgagctctt
gtcaaatccgtgccattcttcacaaacgccgatcctcaattcgtgtcggcggtcatcagt
aaattagaattcgaagtctttcagccgggggattatgtaattagggagggaactatggga
aataaaatgtactttatccaggagggcatcgtcgacattattaccaaggacaatgaaatc
gccacctcgctttctgatggctcatattttggcgagatatgcctgcttaccaatgcaaaa
cgagtggctagtgtgcgggcagaaacatacgtcaatttatattcactgtcagtacaacat
ttcaattcagtactggaacgatatccgctcatgcgcagaacgatggaaagtgttgccgca
gaacgactaacgaaaatcggcaaaaatccgagcatcgttagtagtagagcggatctggag
gaggaccagaaattagtcaatgagatcgtcatggaatccacccctgtcgtaacgagtgct
agtgaagacgaggacaaagattcagacgacagctccgagagttcgaaaagctcgcgcagg
aagaagaaattcaagttcgatttcacaggaaagttgcaaaaaatcactgaggaaaggaag
tcgaaatcaagagagagccttcacaaggattcccttgatatgccaaacgggaaaatggaa
aagttgcgcaagatgccgtccggttccaatttgtttgggctacgagtaggttttgcaggg
ttttctgacagaaaacgatcggaaagtgtgggagcgaatttgaattcaatagaacatcat
tctgggtcgggccaatcggggcaaagttatcttcctcgtagggccagttttcttggaacg
aagttctttaaaccgaaagaaccaaagaaagaaaaaaaagaaaggaccagatcaacggga
ggaaatgattcaccatcatcagatgggaaaggcggtgtgattcagttcctaacagttccc
cttcaagctgatctgaggcataaactaaagggaaagaaatcgaaatcagaacactcggtt
tcacaaaaagaacctcccaccaatatgcattcccaggacattattgaggaatctcctctc
aatgtgcaatcaggaagcgatagtataccagaaacagtggtgcatcagaccgatagggct
aaagaatgcgtctatcagatagaggatatagatgagtcatcacccagttcccatctttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (68)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (86)   

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