KEGG   Crassostrea gigas (Pacific oyster): 105338957
Entry
105338957         CDS       T03920                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105338957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crg03019]
    105338957
   03016 Transfer RNA biogenesis [BR:crg03016]
    105338957
   03012 Translation factors [BR:crg03012]
    105338957
   04131 Membrane trafficking [BR:crg04131]
    105338957
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105338957
Messenger RNA biogenesis [BR:crg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     105338957
Transfer RNA biogenesis [BR:crg03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    105338957
Translation factors [BR:crg03012]
 Eukaryotic type
  Elongation factors
   105338957
Membrane trafficking [BR:crg04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    105338957
Exosome [BR:crg04147]
 Exosomal proteins
  Proteins found in most exosomes
   105338957
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1
Other DBs
NCBI-GeneID: 105338957
NCBI-ProteinID: NP_001292242
UniProt: Q75W48
Position
LG1:complement(18033206..18038521)
AA seq 462 aa
MGKEKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDQRTIQKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETTKYHVTIIDAPGHRDFIKNMITGTSQADCAVLIIAAGT
GEFEAGISANGQTREHALLAFTLGVKQLIIGVNKMDSTEPPYSEARFNEIKGEVEKYIKK
IGYNPKAVPFVPISGWHGDNMIEASTKMEWFKGWAIERKEGNASGKTLLEALDSILPPKR
PTDLPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPPNITTEVKSVEMHHESLP
EAVPGDNVGFNIKNVSVKEIRRGNVCGDSKNDPPKGAKNFLAQVIILNHPGEIKNGYAPV
LDCHTAHIACKFVEIKEKCDRRSGKVLEEAPKCIKNGDAGMVLMVPSKPMCVEAFSKYAP
LGRFAVRDMRQTVAVGVIKEVEKAEPSQGKVTKAAQKAGGKK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggtaaggaaaagactcacatcaacattgtcgtcattggtcatgtcgactctggaaaa
tcaacttccactggccatctcatttacaaatgtggtggtattgaccagagaaccatccaa
aagttcgagaaggaagctgctgagatgggaaagggttctttcaaatacgcctgggtgttg
gacaaactgaaggcagagcgtgaacgtggtatcaccattgacattgctctgtggaagttc
gaaaccaccaagtaccatgtcaccattattgatgctcccggccacagagatttcatcaag
aacatgattacaggaacttcacaggctgactgtgctgtgttgatcattgctgctggtact
ggtgaatttgaagctggtatctctgctaacggacaaacccgtgaacacgccttgttggct
ttcactttgggagtaaagcagctcatcattggtgtcaacaaaatggacagcactgaacca
ccatacagtgaggctcgattcaacgaaatcaagggtgaagtagagaagtacatcaagaag
attggatacaaccccaaggctgtccccttcgtccccatctctggatggcacggagataac
atgattgaggcttccacaaagatggaatggttcaagggatgggccattgagaggaaagag
ggaaatgccagcggaaagacccttttggaagctttggattctatcctgccaccaaagaga
ccaactgacttacctcttcgtcttccacttcaggatgtctacaagattggaggtattgga
acagtgccagttggtagagtggaaactggtattatcaaaccaggtatggttgtcaccttt
gctccacccaacatcaccactgaggtaaaatctgtggaaatgcaccacgaatctctccca
gaggctgtccctggtgacaatgttggcttcaacatcaagaacgtgtccgtaaaggaaatc
cgtcgtggaaacgtctgtggagacagcaaaaatgatccaccaaagggcgccaagaacttc
cttgcccaggtcatcatcttgaaccaccctggtgagatcaagaatggatatgcgcctgtc
cttgattgccacactgctcacattgcctgcaagtttgttgaaatcaaagagaaatgcgat
cgtcgtagtggaaaagtcttggaagaggcaccaaaatgcatcaagaacggagatgctggt
atggtcctcatggttcccagcaagcctatgtgtgttgaagctttctctaaatatgcaccc
ctgggacgttttgctgtccgtgacatgaggcagaccgtggctgttggtgtcatcaaggag
gttgagaaggccgagccatcacagggcaaagtcaccaaggctgcacagaaagccggtgga
aagaagtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (367)   
   KEGG ORTHOLOGY (1)   
   RefGene (363)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (14)   
   RefSeq(nuc) (4)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (399)   

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