KEGG   Crassostrea gigas (Pacific oyster): 105345062
Entry
105345062         CDS       T03920                                 
Name
(RefSeq) nucleolar protein 56
  KO
K14564  nucleolar protein 56
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105345062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crg03009]
    105345062
Ribosome biogenesis [BR:crg03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    105345062
 Prokaryotic type
    105345062
SSDB
Motif
Pfam: Nop NOP5NT
Other DBs
NCBI-GeneID: 105345062
NCBI-ProteinID: XP_034328493
Position
LG4:34712896..34719273
AA seq 544 aa
MPQSLYVLFEHASGYGLFRVKEFEEVATFIPEVEKSTNDVSKFQSLVKLLAFSPFKSGTN
ALDNMNSISEGLLHDDLQVFLESNVPKGGKKDKVVVGVSDAKIGAAITEELGIKCSHIGV
VPEVIRGIRLHFPNMVKGLTEVSSAKAQLGLGHSYSRAKVKFNVNRADNMIIQSISLMDQ
LDKNINTFSMRIREWYSYHFPELVKIISDNYLYAKVVKLIGNRKAFTDESMEQLEELVMD
GGKAQAILDASRSSMGMDISPIDLMNIEAFTSKVISLTEYRKGLADYLRSKMKQVAPNLG
TLIGDQVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRAIKTKGNTPKYGLIFHSTFI
GRAGAKNKGRISRYLANKCSIASRIDCFSEIPTQVFGDHLKQQVEDRLKFLDTGEVPQKN
IDVMKEAVQEATVVQAKVAKKEKKKKKKEKKMSSANDDTLDTTQEADTTQEMDVSQTEEP
KKKKKKAKRKSEGEGMDTTQEMDTTQEEEPPKKKKKKTKVEAEEVDEPEEDLSKKKKKKK
KNKE
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgccacaatcgttgtacgtgttatttgaacatgcctctgggtatggcttgttccgagtc
aaagaatttgaggaggtggcaacctttatcccagaggtggagaagagcacaaatgatgtc
agcaaattccagtcgctcgtcaagctgctggctttttcacctttcaaaagtggaactaat
gccttggataacatgaacagcatctcagaaggtctccttcatgatgatctgcaagttttt
ctggagtctaatgttcctaaaggaggaaagaaggacaaagtggtagtaggagtgtccgat
gctaaaattggcgccgccattactgaggaactaggaatcaaatgcagtcatattggggta
gtaccagaggtaatcagaggtatcagacttcattttcctaacatggttaaaggactgacg
gaggtttcatccgctaaagctcagctaggtctgggtcatagctactccagggctaaagtc
aagttcaatgtcaacagggcagacaacatgatcatccaaagcatcagcttaatggaccaa
ctggacaaaaacatcaacactttctccatgaggattagagagtggtactcctatcatttc
ccagaactggtgaagattatctcggacaactatttgtatgctaaggtggtcaagttgatt
ggaaacaggaaggcgtttacagatgagtccatggaacaactggaagagctggtcatggac
ggtggcaaggcccaagccattctggacgccagccgctcatctatgggaatggacatttct
ccgatcgatctgatgaacatcgaggcattcacctccaaggtgatttcactgacagagtac
aggaaaggtttggccgactatctcaggagtaagatgaagcaggtggctcctaatctagga
acactcattggggaccaggttggagcccgtttaattgctcatgcaggcagcctgacaaat
ctagctaaatacccagcatccactgtacagattcttggagcagagaaagctctgttcagg
gctatcaaaacaaagggaaatactcccaaatatgggcttatctttcactccacattcatt
ggtcgagctggagccaaaaataagggaaggatatctagatacctagccaacaagtgttcc
attgcctctcgtattgactgcttctcagaaattccaacacaggtgtttggggaccatctg
aaacaacaagtggaggaccgtctgaaattccttgacactggggaagtaccacaaaaaaat
attgatgtcatgaaggaggcagtgcaggaggcaactgttgttcaagccaaagtggccaag
aaagagaaaaagaagaagaagaaagaaaagaaaatgtcctctgccaatgatgataccctg
gatactacacaggaagcagacaccactcaagaaatggatgtctcacagacagaggagcca
aagaagaagaagaagaaagcgaagagaaagtcagagggagagggtatggacaccacccag
gagatggataccacccaggaagaggagcctcccaagaagaagaagaagaagactaaggtg
gaggctgaggaggttgatgaacctgaagaagacctgtcaaagaagaagaaaaagaagaag
aagaataaggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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