KEGG   Carnobacterium sp. 17-4: CAR_c07300
Entry
CAR_c07300        CDS       T01452                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
crn  Carnobacterium sp. 17-4
Pathway
crn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:crn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CAR_c07300 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crn03400]
    CAR_c07300 (mutM)
Enzymes [BR:crn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CAR_c07300 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CAR_c07300 (mutM)
DNA repair and recombination proteins [BR:crn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CAR_c07300 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zf-dskA_traR zf-RING_7 DZR Auto_anti-p27
Other DBs
NCBI-ProteinID: AEB29424
UniProt: F4BNJ9
Position
755587..756423
AA seq 278 aa
MPELPEVETVRKGLEKLVSEATIESVDIYWDRIISGPIETTEFKRILMGEKIMEFDRRGK
YIIIRFKQWALVSHLRMEGKYEVEESSAPLKKHTHVVFHLADGRDLRYLDVRKFGRMTLV
PIGEEFTATGIKLLGPEPTVETFDEAIFYKTLQTKKRAIKPLLLDQKIVAGLGNIYVDEA
LFLAKMHPLRTANSLQKNEVSLLHEAIIKVLGDAVEAGGTTIRTYQNALGEAGSFQVKLS
VYGKKGLPCIRCGTPIEKIKVAQRGTHFCPNCQRLMIE
NT seq 837 nt   +upstreamnt  +downstreamnt
ttgccggaattacctgaagttgaaacagttagaaaaggtttagaaaaacttgtgtcagaa
gcaacgatagaatccgttgatatatactgggatcgtatcatttcaggtccaattgaaaca
actgagtttaagcgcattttaatgggtgaaaaaattatggaatttgacagacgaggcaaa
tacattatcattcgttttaaacaatgggcattggtctcgcatttacgtatggaagggaag
tatgaagtagaagaatcatcagcacctctaaaaaaacatacacatgtagtttttcattta
gcggatgggagagacttacgttatttggatgtgcgcaaatttggacggatgacgcttgtg
ccgataggagaagagttcactgcaactgggataaaactattgggcccagagcctacggta
gaaacctttgatgaagcaattttttataaaaccttgcaaactaaaaaaagagctatcaag
cctcttttattagatcaaaagatagtagcaggtttaggaaatatctatgtagatgaagca
ctgtttttagccaaaatgcatcccttaagaacggcaaatagtttacaaaaaaatgaagtt
tctctactacatgaagccatcataaaagtacttggggacgcagttgaagcgggtgggacg
actattcgtacgtatcaaaatgctttaggagaagcgggttcatttcaagtgaaattgtct
gtctatggtaaaaaaggcctaccatgtattcgttgcggcacaccaatcgaaaaaattaaa
gttgcgcaaagagggactcatttttgccctaattgtcagcgattaatgattgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system