KEGG   Cryobacterium sp. LW097: B7495_09625
Entry
B7495_09625       CDS       T04908                                 
Name
(GenBank) ribonuclease E/G
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
cry  Cryobacterium sp. LW097
Pathway
cry03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cry00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B7495_09625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cry03019]
    B7495_09625
   03009 Ribosome biogenesis [BR:cry03009]
    B7495_09625
Enzymes [BR:cry01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     B7495_09625
Messenger RNA biogenesis [BR:cry03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B7495_09625
Ribosome biogenesis [BR:cry03009]
 Prokaryotic type
  rRNA processing factors
   B7495_09625
SSDB
Motif
Pfam: RNase_E_G Imm51
Other DBs
NCBI-ProteinID: ASD22315
Position
complement(2081899..2084565)
AA seq 888 aa
MVEDNDNKKRKGLFGTRKTTRKAAPAKQLEPIGDTPRVPVQDDPAVTPESPSASADRVAS
DQVPFGQASSDQAAAAADQPVAFPALPTPFDETVEVVRRPTTSLIFQAPAILPAPVRSGG
RQLDDEDDDPEEGSTVRRRARRRTGEEGRSDDPANTVVRVRTPREPELITEPQRIKGSTR
LEAKKQRRRDGRDAGRRRPVITEAEFLARRESVDRAMVVRAKHNKIQIGVLEDGVLVEHY
VAKNQDASLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYSGEVDWDAAAVNSPGASQT
RRIELALKPGDKVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPNGSMNGISRKLPDTER
ARLKKILKEVLPDNVGVIVRTAAEGATDEQLTLDVNRLTAQWASIAKQVETVSGPALLHS
EPDLLIKIVRDVFNEDFHKMVISGDDAQEVIESYLRQVAPDLVERVQRYEGERDAFDEYR
ISEQIEKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNLEAADE
IVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMTR
KKLGLGLLESFSENCEACAGRGIVIHHDPVVKHRQTAQPTQERRPRSKSNGNGGSGHDAG
NSGQRGNGNQNSGQAHGAPVQTDATKAGHGTHGITEDAKHALALIAARTISRSLTGSIPV
LAPTETAAPAAAPAAEADAPTAAESVDTAPTARSNSRGNRSGSRSGGRTGQSTDSAPVVQ
PDRASTDPFGAEPETAAPAVQAPLLAPEAVPADSADGVAILDIPVQKSPRSRRPVSKQVT
DQLLDSVLEALPEPKQPGQGRSRSRRVTTAGGPTATVQPIVAPTQDNA
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggtggaagacaacgacaacaagaagcgcaagggcctgttcggcactcgcaaaacaacc
aggaaggcggcaccggccaagcagctcgaaccgatcggtgacacgccccgtgtacccgtt
caggacgacccggccgtgacgccggagtcaccgtcggcttcggccgaccgagtggcttcc
gaccaggtgccgttcggccaggcctcgtccgaccaggcggcagccgcggcggaccagccg
gtggcattccctgccctgccgacacccttcgacgagaccgtcgaggtcgttcgccggccg
acgacgtccctgatcttccaggccccggcgattctgccggccccggtccggtccggcggc
cgtcagctcgacgacgaggatgacgaccccgaagagggctcgacggtgcgccgtcgcgcg
cgccgtcgcaccggtgaagaaggccgcagcgacgaccccgccaacaccgtggtgcgggtg
cggactccgcgcgaacccgagctgatcaccgagccccagcggatcaagggctccacccgc
ctggaggccaagaagcagcgccgccgcgacggccgcgacgccggccgccgccgccctgtc
atcacggaggccgagttcctcgcccgccgcgagtcggtcgaccgcgccatggtcgtgcgg
gccaagcacaacaagatccagatcggcgttctcgaagacggagtgctcgtcgagcactac
gtggccaagaaccaggatgcgtcgctcatcggcaacgtctacctcggtcgtgtgcagaac
gtgttgccgagcatggaagccgccttcgtcgacatcggccgcggccgcaacgccgtgctc
tactccggtgaggtcgactgggacgccgccgcggtgaactccccgggtgcgagccagact
cgccgtatcgagctggcgctcaagcccggcgacaaggtgctggtgcaggtcaccaaggac
ccgatcggtcacaagggcgcccggctcaccagccaggtgtcgctgcccggccgctacctc
gtctacgtgcccaatgggtcgatgaacggcatcagccgcaagctgcccgacactgagcgc
gccaggctgaagaagattctcaaggaggtccttccggacaacgtgggtgtcatcgtgcgc
accgcagccgagggcgcgaccgacgaacagctcaccctcgacgtcaaccgcctcaccgcg
cagtgggcctccatcgccaagcaggttgaaacggtgtccggtccggccctgttgcacagc
gagcctgatctgctgatcaagatcgtgcgtgacgtcttcaacgaggacttccacaagatg
gtcatctccggcgacgacgcccaggaggtcatcgagtcctacctgcgccaggtggctccc
gacctcgtcgagcgcgtccagcgctacgagggcgagcgcgacgcgttcgacgaataccgc
atctcggagcagatcgaaaaggcactggaccgcaaggtctggctgccgtcgggcggttcg
ctcgtgatcgaccgcaccgaggcgatgaccgtcgtcgacgtcaacaccggcaagttcgtc
ggatccggcggaaacctcgaggagaccgtcaccaagaacaacctcgaagcagccgatgag
atcgttcggcagctgcgcctgcgcgacatcggcggcatcatcgttgtcgacttcatcgac
atggtcctggagtccaaccgtgacctggtgctccgtcgcctggtcgagtgcctcagccgc
gaccgcaccaagcaccaggtggccgaggtcacctcgctcgggctcgtgcagatgactcgc
aagaagctcggcttgggcctgctcgaatcgttcagcgagaactgcgaggcctgcgccgga
cgtggaatcgtcatccaccacgaccccgtcgtcaagcaccgccagaccgctcagcccact
caggagcgccgcccccgcagcaagtccaacggcaacggcggctccggccacgacgccggc
aactccggtcagcgcggcaacggcaaccagaattccggtcaggcgcatggtgcgcccgta
cagacggatgccaccaaggccggccacggcacgcacggaatcaccgaggacgccaagcac
gccctcgcgctgatcgccgcgcgcaccatcagccgctcactgaccggttcgatccccgtg
ctcgcgccgaccgagacggctgccccggccgccgccccggctgctgaggccgacgccccg
accgcggccgagagcgtcgacaccgcgcccacggcccgttcgaactcccggggcaaccgt
tcgggcagtcgttcggggggccgcaccggccagtcgaccgacagtgcgcccgtcgtgcag
cccgaccgggcgtccaccgacccgttcggcgcagagcccgagaccgccgccccggcggtt
caggcgcctctcctggctccggaggccgtgccggccgactcggccgacggtgtcgctatt
ctcgacatccccgtgcagaagtcaccgcgcagccgccgtccggtgagtaagcaggtcacc
gaccagctgctcgattcggtgcttgaagccctgccggagcccaagcagcccggccagggt
cgttcgcgcagccgtcgggtcaccaccgccggcggtccgaccgccaccgtgcagccgatc
gtggctcccacgcaggacaacgcctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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