KEGG   Cryobacterium sp. LW097: B7495_10355
Entry
B7495_10355       CDS       T04908                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cry  Cryobacterium sp. LW097
Pathway
cry03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cry00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B7495_10355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cry03400]
    B7495_10355
Enzymes [BR:cry01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     B7495_10355
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     B7495_10355
DNA repair and recombination proteins [BR:cry03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     B7495_10355
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zf-TFIIB Auto_anti-p27 DZR DNA_ligase_ZBD NFACT_N Zn_Tnp_IS91
Other DBs
NCBI-ProteinID: ASD22441
Position
complement(2239555..2240529)
AA seq 324 aa
MPELPEVEVVRTGLETAVSGAAITGVEIFDERSLRRHDRSLGDFEALVTGARIEAAVRRG
KFLWFPLAVAPGEAPGSGARRAIVAHLGMSGQVLLRTPGETPEKLLRIRLTLQNPEHGEL
ALHFVDQRIFGSMAVDTMQATDDGRSAGYAGPGIAPGRPTTGTADALPAWSGLIPSQVAH
IGRDPLDPAFSAPAFYRALARTRSGIKRVLLDQQVVSGIGNIYADEALFDARVHFDQPAA
TLSAASARRLLTAVRAILLRALAEGGTSFDAQYVNVNGQSGYFAHSLNAYGQHGKPCPRC
GTDLVRVKFMNRSSHYCPRCQRLR
NT seq 975 nt   +upstreamnt  +downstreamnt
gtgcctgaacttcccgaagtcgaggtcgtgcggaccggcctggaaaccgccgtgtccggc
gccgcgatcacgggtgtcgaaatcttcgacgagaggtcccttcgtcgccacgaccgctcg
ctcggcgatttcgaagcgctcgtgaccggcgcccggatcgaggccgccgtgcgccggggc
aagttcctctggttcccgctggccgtcgcaccgggggaggcgccggggtcgggcgcgcgc
cgggccatcgtggcccacctcgggatgagcggacaggtgctgttgcgtaccccgggtgag
accccggaaaagctgctgcgcatccgcctaaccctgcagaaccccgaacacggtgaactg
gccctgcacttcgtggaccagcgcatcttcggcagcatggccgtcgacacgatgcaggcc
accgacgacggccggtcggccggttacgcagggcccggcatagccccaggccggccaacc
accggtaccgcggatgcgctcccggcctggtccggcctcatccccagccaggtggcgcac
atcggccgggacccgctcgacccggcgttctccgccccggccttctaccgagcgctggcc
cgcaccaggtcaggcatcaaacgggtgttgctcgaccagcaggtcgtcagcgggatcggc
aacatctatgcggacgaggcactcttcgacgcccgggtgcacttcgaccagccggccgcg
acgctgtccgcggcgagcgcccgccgcctactcaccgccgtccgcgcgattctgctgcgg
gcgttggccgagggcggcaccagcttcgacgcccagtacgtgaacgtcaacggccagtcc
ggctacttcgcgcacagcctcaacgcctacgggcaacacggcaagccctgcccccgctgc
ggcaccgacctcgtgcgggtcaaattcatgaaccgctcgtcgcactactgcccgcgctgt
cagcggctgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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