KEGG   Chlorocebus sabaeus (green monkey): 103216340
Entry
103216340         CDS       T04361                                 
Symbol
EXOSC1
Name
(RefSeq) exosome component 1
  KO
K07573  exosome complex component CSL4
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103216340 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103216340 (EXOSC1)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103216340 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     103216340 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 Nairovirus_NSm
Other DBs
NCBI-GeneID: 103216340
NCBI-ProteinID: XP_007961938
Ensembl: ENSCSAG00000005870
Position
9:complement(90603371..90615934)
AA seq 236 aa
MEFTRNDKEHQLTRILLRNCAWVWPMRNRLRFHPGSGTAAIMAPPVRYCIPGERLCNLEE
GSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVGAIVTCKVSSIN
SRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQ
SNYLLTTAENELGVVVAHGESGIQMVPISWCEMQCPKTHTKEFRKVARVQPEFLQT
NT seq 711 nt   +upstreamnt  +downstreamnt
atggagtttacacggaacgataaagaacaccaattgacgcgtatcttactgcggaactgt
gcctgggtttggccaatgagaaatcgacttcgttttcatccgggttctgggacagcggca
atcatggcaccacctgtgagatactgtatccccggcgaacgtctgtgtaacttggaggag
ggcagcccgggcagcggcacctacacccgccacggctacatcttttcgtcgcttgccggc
tgcctgatgaagagcagcgagaacggcgcgcttcctgtggtgtctgtagtgagagaaaca
gagtcccagttactgccagatgtgggagctattgtaacctgtaaggtctctagtatcaat
tcacgctttgccaaagtacacatcctatatgtggggtccatgccacttaagaactctttt
cgaggaactatccgcaaggaagatgtccgagcaactgaaaaagacaaggttgaaatttat
aagagtttccgcccaggtgacattgtcttggccaaagtgatctctctaggtgatgcacag
tccaactacctgctaaccactgccgagaatgagctgggagtggtggtagcccacggtgag
tcaggtatccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacact
aaagaattccggaaagtagcccgagtacaacctgaattcttgcagacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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