KEGG   Camelina sativa (false flax): 104699217
Entry
104699217         CDS       T05044                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52-like
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104699217
   03041 Spliceosome [BR:csat03041]
    104699217
   03036 Chromosome and associated proteins [BR:csat03036]
    104699217
Enzymes [BR:csat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104699217
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104699217
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104699217
Spliceosome [BR:csat03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104699217
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104699217
SSDB
Motif
Pfam: DEAD ResIII
Other DBs
NCBI-GeneID: 104699217
NCBI-ProteinID: XP_010412854
Position
6:18409264..18411958
AA seq 370 aa
MSSNSWADVSESERAPSGGWGYSRPSRTNYVPPHLRSRTPSSEFAAPSPGNDRGGYGGPH
SGYGGRGQGYAGRGGGGYSGRGGGGGGWNNRSGGWDRRDTETNPFGNDGNADPAVTEQEN
TVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILA
AGRDLMACAQTGSGKTAAFCFPIISGIMKDQNIERPRGVRGVYPFAVILSPTRELACQIH
DEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRF
LALDEADRMLDMGFEPQIRKIVQQMDMPPPGARQTMLFSATFPREIQRLASDFLSNYIFL
AVGRVGSSTD
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagttcaaattcatgggctgatgtttctgaatcggagagggcaccatctggtggttgg
ggttattctcgtccgtcgcgaaccaactatgttcctccacatctcaggagtcgtacacca
tcttcggagtttgctgctccttcacctggtaatgatcgtgggggatatggtggtccacat
agtggttatggtggtcgaggccaaggttatgctggtcgaggaggtggtggctattctggt
agaggaggtggtggtggcggttggaataacagaagtggaggttgggaccgtagggatact
gaaactaacccgtttggtaatgatggaaatgcagacccggctgttaccgagcaggaaaac
acagtcattaactttgaggcgtatgaagatattcccatcgagacaagtggggataatgta
ccaccccctgttaatacatttgcagagatagacctcggagaagctctgaatctaaatatc
cagaggtgcaaatacgtgaagcctacccctgtgcagcgtaatgcaattcccattttggct
gctggaagggatttgatggcttgtgctcagacagggtctgggaagacagctgccttttgt
tttccgattattagtgggattatgaaggatcagaatatagagagaccacgtggagttcgg
ggagtctatccttttgctgtcatcctctcaccaacaagggagttggcttgccagatacat
gatgaagcaagaaagttctcgtatcaaactggagtgaaagttgtggttgcttacggagga
acacctgtcaaccaacagattagggagcttgaaagaggggttgatattcttgttgcaact
cctgggagattaaatgatttgctggagagaggtagagtctcattacagatggtaagattt
ttggcgcttgatgaggcggacagaatgctggacatgggttttgaaccacaaatcaggaag
atcgttcagcagatggacatgcctcctcctggtgcccggcagacaatgctgttcagtgct
acatttcctagggaaatacagagacttgcatctgattttctttcaaattacatatttctg
gctgttggaagagtgggttcaagtacggac

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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