KEGG   Camelina sativa (false flax): 104714668
Entry
104714668         CDS       T05044                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03410  Base excision repair
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104714668
   03410 Base excision repair
    104714668
   03420 Nucleotide excision repair
    104714668
   03430 Mismatch repair
    104714668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104714668
   03036 Chromosome and associated proteins [BR:csat03036]
    104714668
   03400 DNA repair and recombination proteins [BR:csat03400]
    104714668
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104714668
  DNA Replication Termination Factors
   ELG1-RFC complex
    104714668
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104714668
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104714668
  Check point factors
   HRAD17(Rad24)-RFC complex
    104714668
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Rad17 Mg_chelatase AAA_16 Viral_helicase1 AAA_5 nSTAND3 AAA_11 AAA_24 RuvB_N AAA_19 bpMoxR AAA_25 MeaB AAA_18 AAA_assoc_2 AAA_30 ResIII RNA_helicase AAA_28 AAA_7 KTI12 IstB_IS21 NTPase_1 SRP54 SLFN-g3_helicase DO-GTPase1 UvrD-helicase AAA_3 ABC_tran FtsK_SpoIIIE ATPase_2
Other DBs
NCBI-GeneID: 104714668
NCBI-ProteinID: XP_010430402
Position
9:complement(37285364..37287336)
AA seq 333 aa
MAASSSTSSGVESEKPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTG
KTTSILALAHELLGKNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
EADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGR
LMIVVQAENVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRLVNQENVFKVCDQPHPL
HVKNIVRNVLESKFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYEMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLAIVRETAKAP
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcggcgtcgtcttcaacctcttccggcgtggaaagcgagaaaccatgggtagagaaa
tacaggccgagcaaagtagtcgatatcgttggtaatgaagacgccgtctctagacttcaa
gtcatcgctcgcgacgggaacatgcctaatctcatccttgccggtccacctggaacaggt
aaaaccacaagcattttggctcttgctcacgagcttcttggtaagaactataaggaggct
gttctggagttgaatgcatctgatgataggggtattgatgttgtaaggaacaaaattaag
atgtttgcgcagaagaaagtaacacttcctccagggcgtcataaggttgtcattcttgat
gaagctgacagtatgacatctggagcacaacaagcattgaggagaacgattgaaatctat
tcgaactctacgcggtttgcacttgcttgcaacacatcagccaagattattgagcccatt
cagagtagatgtgccttagttcggttctctagattatctgatcagcagatattaggccgt
ctcatgattgtggttcaagcagagaatgttccttatgtacctgaaggcctggaggcgatt
atttttacagctgatggtgacatgaggcaagctctgaacaacttgcaagccactaatagc
gggtttcgtctcgtcaaccaagaaaacgtcttcaaggtctgtgaccagcctcacccactt
catgtcaagaacattgttcgtaatgtgttggaaagtaagtttgatgatgcttgtcacggc
ttaaagcagctctacgatctgggatactctccaaccgacattatcacaacgcttttccgt
ataataaagaattacgagatggctgagtatctgaaacttgagttcatgaaggaaactgga
tttgcgcatatgagaatctgcgatggagttggatcatatcttcaactatgtggtcttctg
gctaaactagccattgttcgtgaaacagcgaaagcaccttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (36)   
   Pfam (36)   
All databases (53)   

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