KEGG   Camelina sativa (false flax): 104731804
Entry
104731804         CDS       T05044                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC104731804
  KO
K15333  tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csat03016]
    104731804
   03036 Chromosome and associated proteins [BR:csat03036]
    104731804
Enzymes [BR:csat01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.34  tRNA (guanosine18-2'-O)-methyltransferase
     104731804
Transfer RNA biogenesis [BR:csat03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    104731804
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104731804
SSDB
Motif
Pfam: SpoU_methylase DUF5917
Other DBs
NCBI-GeneID: 104731804
NCBI-ProteinID: XP_010449592
Position
12:15349309..15358936
AA seq 1820 aa
MGSSVITSLSLSFKQVPPAAVPAFLDCVLSSTGVSPSTLFESLINELPFRLEDTVNGDKR
FDSDDCNHIASLVSGLCHLLKNFGFGAADNHNALQLFVWRVFIPLMKMVRAYDLDMLNEI
VQSFIDVVIETSALDTLGVSLVPFLMRSVGVSMGMLQHEESDFIKWGELMLCDSLNTVNM
DENYIANLSGSFPIPLSCHLLNLILNAANQSHEAVPEVESFAAGMLWDLCNTTERLLSQS
VEHRSCAVSFLLPAIFKAFSSQSSLKISRQGNMYILSRNGFKKRIWECCKKLFSVGSMER
RDAYSVLSLCLSTGSWTDETEIFVSEKDPVEFDFRSEQEFWDEIKKGLVVDESLVRKQSL
HILKSVLSISEVSKTTSEKKAEADSVHRSLTRKETWAEKEAKSLGVGELYGSVDSGLTSQ
QEWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGSLKSDCNNSHHGHMEIPDE
ETNILNWLEVLWNRGFLHDNPLVRCTVMESFLGIEWRRYKTCTQSMSQTFVLGPFIEGLN
DPIHHKDFGLKGIYTSRTIEGAAQYVCAYTSCLNSRNRVRFLIDLASLAKKQSFGRAGFM
ALVQCIVSTSYVVGGYGDKEMWHLENKFSRTADEPSCEHLSQDDMTHILDVLKFVAESSR
QHFNHKYRIRVYQKVLETAASAVNPCIVPLGTLLQFVSAIPREFTDHDGSLRKMMLEWLQ
GCNRKTSNSLCSDGNRLLASLYVYLKGFISDHGESFDDDDLEAWDSQTKRWARVFFLIIN
SEEHLTDIIMFVQSNGHNFFQEKYHLERAPTKFLIFILSMLLELQNMQDGISELSSSVKS
MSCIGSVEKTGKQIVDDASIIKKKFAIVLLSILKELIPFADSSCSIFWSHTTVENGVLSG
SVIGKLGGPSQRRLSGPSTTAVLEAVTLVKTIGWISSYCAQVTSGVELKLALAFFWKFTQ
HTISSQICNSEAAAEVYLAAFEALAAVLNAFVSLCSAGAFNLLENDNTLLSMVDGEFWLQ
VSVPAFLHNINHLLTAGLLVRSRRAVLLSWKWLCVESLLSLMHILDARRIPGDRKSFFSD
DTVKSIFQDIVESLENAGEGSALPMLKSVRLALGILASGNSSLDGFLGVDTQTMWQLVKS
CWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHIAEDGHGPLKWFVEKILEEGQKSPR
TIRLTALHLTGLWLMYPRTIKYYIKELRLLTLXGSVAFDEDFEAELSDNNDARTEVSLLA
KSPDPELTELFINTELYARVSVAGLFQKLANLAYIVEPESQNQDCQDALVAGKLFLLELL
DAAVHDKDLSKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVLQVMDSVHICLHRNNLP
AVRQYLETFAINIYLKFPALVKEQLVPILQNYDSKAQQALSSYVFVAANIILHAEKTAQQ
THLRELLPPIIPLLTSHHHSLRGFAQLLVHRVLFRLFPPVESASSQTISLEKLSFENLKS
YLDKNPDCSRLRTSMEGFLDAYDPSTSATPAGVFVNRVEDSEFECVPTCLMDNVLSFLND
VREGLRASMAKDVVTIKNEGFKMNEEPNRRLIMSNTDEQKLSEPSSLDFQRKITLSKHEK
QDASSTSVLRDGETYKRLFEMEKEDELVSQLLRSRSMEVERLKSDRQSLILVASLVDRIP
NLAGLARTCEVFKASGLVVADANMIHDKQFQLISVTAEKWVPIMEVPVNSLKLFLEKKKR
EGFSILGLEQTANSISLDKHQFPKKTVLVLGREKEGIPVDIIHILDACIEIPQLGVVRSL
NVHVSGAIALWEYTRQHRIQ
NT seq 5463 nt   +upstreamnt  +downstreamnt
atgggttcctctgtgattacttcactgtcattgagcttcaaacaagttccaccagcagct
gttcctgcgtttcttgactgtgttttaagctccacaggtgtatctccctcgacccttttc
gaatcacttatcaatgagttgccttttcgtttagaggatacggttaatggggataagagg
tttgattctgatgattgcaaccacattgcttcattggtgtctgggctttgtcatctactt
aagaattttggttttggtgcagcggataatcataatgcgttgcagttatttgtgtggaga
gtgtttattccactcatgaagatggttcgtgcatatgatttggatatgcttaatgagatt
gtacaatcgttcattgatgtagtgattgagactagtgcactggatacattgggagtgagc
ttggtgccttttttaatgagatcagttggtgtttcgatgggaatgcttcaacatgaagaa
tcagatttcatcaagtggggagagctgatgctttgtgattctttgaatacagtaaatatg
gatgaaaactacattgcgaatttgtctggatcatttccgattccactgtcttgccatctt
ctgaatttgatactgaatgctgctaatcaaagtcacgaagcagttccagaggtggaaagt
tttgcagctggtatgctttgggatttgtgtaatacgactgaacgtcttttgtcacaaagt
gtagaacatcgttcgtgtgctgttagtttcctccttcctgctattttcaaagcattctct
tctcagtcctctttgaagatctcacgccaaggaaatatgtacatactttcaaggaatgga
tttaaaaaaagaatttgggaatgctgcaagaagctgttctcggttgggtcaatggagaga
agggatgcttacagtgtcctctctttgtgtctttctactggctcttggacagatgaaact
gaaatttttgtttcagaaaaagaccctgttgaatttgacttcagatccgaacaagagttt
tgggatgaaatcaagaaaggcttggttgtggatgagagcttagtaaggaagcagtcattg
catatactgaaatcggttttatctataagtgaagtgagtaagaccacttctgaaaagaag
gctgaagcggattcagttcatcggtccctgacaagaaaggagacgtgggcagaaaaggaa
gccaagtcgcttggtgtgggagaattgtatgggtctgttgactctgggttgaccagtcag
caggagtggcaagcttttctgctcctgtatgagatgcttgaagagtacggcactcacctc
gtagaggcagcatggagtaaccagattgatttattaatcaagtcatctctcagatatgat
ggatccttgaaatccgactgtaataattctcatcatggtcacatggaaattccagatgaa
gaaactaatattttgaattggttagaggttctttggaataggggctttcttcatgataac
cctctagtcaggtgcacggtcatggagtcttttctaggtatcgagtggagaagatataaa
acatgtacacaatcaatgtcccagactttcgtacttgggcctttcatagagggtttgaat
gatcctatacatcacaaggattttgggctgaaaggaatctatacctcaagaacaattgaa
ggtgcagctcaatatgtgtgtgcgtacacaagttgcctcaactcaaggaatcgggttcga
tttttgatcgacctggcatctcttgcgaagaaacagtcttttggtagagctggatttatg
gctctcgtacaatgcattgtttctacgtcatatgtggttggaggatatggggacaaggaa
atgtggcatctcgaaaataaattctctcggactgccgatgaaccttcttgtgaacattta
agtcaagatgatatgacacatatactggatgtcttgaagtttgttgcggagagcagcaga
cagcattttaatcataaataccgtatccgagtctatcaaaaagtgttagagactgctgcc
tctgcggtgaacccttgtatagttcctctcggaacactattgcagtttgtttcagcaatt
ccgcgggagtttactgaccatgatggttcattgcggaaaatgatgctagaatggctccag
gggtgcaacagaaagacttccaacagtttatgttctgatggtaatcgtcttctggcgagc
ctttatgtgtaccttaaaggatttatcagtgatcatggtgagagttttgatgatgatgac
ttggaggcatgggattcccaaacaaaacgatgggcaagagtatttttcctcataattaat
agtgaagagcatctcaccgatatcataatgtttgtgcaaagtaacggccataattttttc
caagagaagtaccatttagaacgggcacctacgaagtttttaatctttattcttagtatg
cttttggagctccagaacatgcaagatggaatttctgagcttagttcttcggtgaaaagc
atgtcgtgcattggctctgtcgagaaaactggcaagcagattgttgatgatgcttcaatt
attaagaaaaagtttgctattgttctcttatcgatactgaaggagctgattccatttgct
gattcatcttgttcgatattttggtctcacactactgtggagaatggtgttctgtctggt
tctgttataggaaaactaggaggtccaagtcaacgccggctatctggtccttctacaaca
gctgtactagaagctgtaacgttggtgaaaactattgggtggatctcgtcatactgtgcc
caagtcactagtggtgttgaactcaaattagcattggctttcttttggaagttcacccag
cataccatatcatctcaaatttgtaattctgaggctgcagctgaggtctatcttgcagcg
tttgaggcgctagctgcagtattgaatgcatttgtgtccttgtgctcagctggagctttc
aacctattagaaaacgataatacattgttatccatggtagatggtgaattctggttacaa
gtttcggttccagctttcctccataacattaatcatcttctcacagcaggacttctagta
agaagtaggagggcagttctgctaagctggaagtggctttgtgtggagtctctgttatca
ctcatgcatattcttgacgccagacgtattccaggggatagaaagtcgttcttctcagat
gatactgttaaaagcatttttcaggatattgtagagagccttgaaaatgcaggggagggt
tccgctttgcctatgctgaaatctgtcagactcgcgttggggatacttgcgtctgggaac
tcatctttggatggtttcttgggtgtggatactcagacgatgtggcagttggtcaaatca
tgttggatattgcatatcagctgcaagaaaaggagggttgcacctattgctgcgcttttg
tcttctgtgttgcattcttctttgtttagtaataaagacatgcacatagctgaagatgga
catggtccactgaagtggttcgttgaaaaaatacttgaggaaggtcagaaaagtccacgc
acaattcgccttacggccttgcacctgacaggactctggctcatgtacccaaggacgata
aagtactatattaaagaattgaggctcctgactctctagggttctgttgcatttgatgaa
gattttgaagctgaattatctgacaataatgatgcaagaactgaagtatcattattggcc
aaaagtccagaccctgaactgacagaacttttcatcaacacggagttgtatgcacgtgtc
tctgttgctggtctgtttcagaagctggctaatttggcctatatagttgaaccagaaagt
caaaatcaagactgtcaagatgctctcgtggctggaaaattgtttctgttggagcttctt
gatgcagcggtgcatgataaagacttgtcaaaggagctttacaagaagtatagtgcaatc
catagacggaaaatacgtgcttggcagatgatatgcattatgtcgcgatttgtcagcaat
gacattgttctccaagttatggacagtgtgcacatatgcttacatagaaataacctgcct
gctgttcgacaatacctggaaacatttgccatcaacatatacctgaaatttccagcattg
gttaaagagcagttagttccaatattacaaaattatgactctaaagctcagcaagctcta
tcgtcctatgtctttgtagcagccaatatcatccttcatgccgaaaagacagctcaacag
acacacctgagagaacttcttcccccaataataccgttattaacttctcatcatcatagc
ttacgtggtttcgctcagttattagtgcatcgagtactctttagactatttccccctgtg
gagtcggcatcctctcaaacaatatccctggagaaactttcttttgagaatttgaagtct
tacctggacaagaatcctgattgttcgagattgcgaacatcaatggaaggatttctggat
gcctatgatcccagcacatctgctactccggcaggtgttttcgtcaatcgtgttgaggac
agtgagtttgaatgcgttccaacatgcctcatggataacgtgctctcttttctgaatgat
gtaagggaaggtctccgtgcttccatggcaaaggatgtagttaccattaagaatgaaggc
ttcaagatgaatgaagagcccaaccgtcggttgatcatgtccaatacagatgaacaaaag
ctttcggagccatcttcgttggacttccagaggaagatcactctatcgaaacatgagaag
caagatgctagctcaacttctgtgctccgagatggggaaacttacaagcggctctttgaa
atggaaaaagaagatgagctcgttagtcagctcttacgatctagaagcatggaggtcgaa
aggctaaaatctgatcgacagagtttgatccttgtggcttcattggttgatcgtattcct
aatcttgctggattagcgcggacatgtgaggtgtttaaagcatcaggtctagttgttgca
gatgcaaacatgatacatgacaaacagttccaactgatcagtgtgactgctgagaaatgg
gttccaatcatggaagtcccagtgaacagtttgaaactgttcttggagaagaagaaacgg
gaaggcttctcaatcttgggactggaacagacagcaaacagcatttcactagacaaacac
caattcccaaagaagacggttttggtgctgggtcgtgaaaaggaaggcatccctgtggac
atcatccatatactggacgcttgtatcgagatcccacaacttggagttgttaggtccctc
aatgttcatgtcagcggcgccatcgccctctgggaatacactcggcaacaccgcattcaa
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system