KEGG   Camelina sativa (false flax): 104732790
Entry
104732790         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104732790
  09122 Translation
   03013 Nucleocytoplasmic transport
    104732790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104732790
   03041 Spliceosome [BR:csat03041]
    104732790
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104732790
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104732790
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104732790
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 Nup160 CNH PROPPIN IKI3 MMS1_N
Other DBs
NCBI-GeneID: 104732790
NCBI-ProteinID: XP_010450677
Position
2:complement(22346933..22349775)
AA seq 314 aa
MEETIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE
LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSL
KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISF
NYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKYN
TDEGVFRIFGFDST
NT seq 945 nt   +upstreamnt  +downstreamnt
atggaggagacgattccgtttaagagcttacatagcagagaatatcaaggtcacaagaag
aaggtacattctgtagcttggaattctaacggaacaaagcttgcttcgggttctgttgat
caaactgctcgtatttggaacatcgaacctcacggtcatagtaaagctaaggaccttgaa
ttaaaggggcatactgatagtgttgatcagctatgttgggatcctaaacattcagatctt
gttgctactgcctctggggataaaagtgttcgtctctgggatgctcgcagtggaaaatgt
acacagcaggcagaacttagtggagagaatataaatattacctacaaacctgatgggaca
catgttgctgttggtaatagggatgatgagcttacaattctggatgtccgtaagtttaaa
cctttacacaggcgaaaattcaattatgaggtaaatgagattgcttggaacatgccagga
gattttttcttcttgactactggacttggcactgttgaagttctttcatatccatctctt
aaaccacttgacactctcacagcccacacagccgggtgttattgcattgcaattgatcct
aagggaagatattttgctgtcggaagtgcggattctttagtcagcctttgggatatctca
gacatgctttgcttaagaacatttaccaagcttgagtggcctgtcaggacaataagcttc
aactattcaggagagtatattgcttcagccagtgaagatttattcatagatattgctaat
gtccaaaccgggcggacagtgcatcagattccatgtcgtgctgccatgaatagcgttgag
tggaatcccaaatacaatttactagcatacgcaggtgatgacaagaatcccaagtataat
actgatgaaggtgttttccggatatttggttttgacagcacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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