KEGG   Camelina sativa (false flax): 104751498
Entry
104751498         CDS       T05044                                 
Name
(RefSeq) RNA pseudouridine synthase 2, chloroplastic-like isoform X2
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csat03009]
    104751498
Enzymes [BR:csat01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     104751498
Ribosome biogenesis [BR:csat03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    104751498
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-GeneID: 104751498
NCBI-ProteinID: XP_010471753
Position
16:20557947..20560397
AA seq 430 aa
MLSISQLPSFSLTSVKSLRYPSSSLSLFFSFLPRVSNFVRASSGTPNLVACSPTESIIPR
VNNAGLRIEETVDSVQGKIRIDSWISSRVIGVSRARVQSSIRLGLVTVNGRVIDKVSHNV
KAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHLLVVNKPAHMVVHPAPGNPTGTLVNGV
LHHCSLPCVVYSNPEEDDSDDETFSDDEEMTTSSSSYAASVRPGIVHRLDKGTTGLLVVA
KDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVSG
GRARHAASRYKVIETLAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMA
LSLLQKRVSRSDQEEIIELISRLDRPCLHAIVLGFTHPCTGEIVNFSCPPPPDLAEIVGL
LRRSGRENAN
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgctctcaatctctcagctgccgagtttctcgttaacctcagtcaaatcccttcgttat
ccttcttcgtctctctctctcttcttctcctttttacctagggtttccaatttcgtcaga
gcaagttctggaacccccaatttggtcgcctgtagtcccacggagagcatcatccccaga
gttaacaacgccggtctcagaatcgaggagacagtcgactccgtgcaagggaagattcgg
attgattcgtggatctcttctcgtgtcattggcgttagccgagctcgtgtacagtctagt
attcgattgggactcgttaccgtcaatggccgagtcattgataaggtttcgcataatgtt
aaagctggcgatgaggtcaattgtacaatatcagagcttcaacctttaaaagctgaagct
gaagatataccattagatatagtttatgaagataaacaccttcttgttgttaacaaacca
gctcacatggttgttcatcctgcgcctgggaatcctactggcacgcttgttaatggcgta
cttcaccattgtagtcttccctgtgttgtttattcaaacccagaagaagatgattccgat
gatgaaactttttcagatgatgaagagatgacgacctcttctagttcatatgctgcttca
gttcgtcctggtattgttcataggttggataaaggcaccactggtttgctcgttgtagcc
aaggatgaacattctcatgcccatctagcggaacagtttaagctacacacaattgaaaga
gtatatgtgagtcttactactggtgttccttctccacctcaggggcgtattgagataccg
attggtcgtgattcgagtaatcgcatccgtatggctgctatacctggaggagtaagcggt
ggaagagcccgccatgctgctagtaggtataaggtaattgaaacactagctggaggtggc
tctgcattggttgagtggagactggaaaccggccgtacccatcagatacgtgctcatgct
aagtatatgggagttcctctattgggtgacgaagtgtatggtggaacaaaaagcatggcc
ctttctcttctgcagaaaagagtctcccgcagtgatcaagaagagatcatagagctaatt
tccagactggataggccgtgccttcatgctatagttctcggctttacgcatccatgcacc
ggggaaattgttaatttttcatgtccaccacctccagatcttgcagagatagtaggcttg
ctacgtagaagcggaagagaaaacgccaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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