KEGG   Camelina sativa (false flax): 104755980
Entry
104755980         CDS       T05044                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104755980
   03015 mRNA surveillance pathway
    104755980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104755980
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104755980
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 104755980
NCBI-ProteinID: XP_010476773
Position
17:complement(7634430..7637665)
AA seq 417 aa
MAKPSRGRRSPSLSGSSSRSSSRSRSRSGSSPSRSLSRSRSRSRSLSSSSSPSRSVSSGS
RSPPRRGKSPAGPARRGRSPPPQSKGASSPSKKAAPTQESLVLHIGSLSRNVNEGHLKEI
FGNFGEVIHVELAIDRAVNLPRGHAYVEFKARADAEKAQLFMDGGQIDGNVVKASFTLPP
RRKVSPPPKPVSSAPKRDASKSDNASAEIEKDGPRRPRDTSPQRKTVLSPRRRSPPLRRG
ASPRRLPDSPPRRRPGSPIRRRGGDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRI
RGSPVRRRSPLPLRRRSPARRVRSPTLRRSPIRRRSRSPIRRPGRSRSRSISPRRGRGPA
GRRGRSSSYSSSPSPRRIPRKVSRSRSPRRPLRGKRSSSNSSSSSSPPPPPPPPRKT
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggcgaaaccaagtcgtggccgtcgttccccttccttgtctggctcttcttctcgttcc
agctccagatcccgttcccgctctggttcgagtccctctaggtctctttcgcgctcccgc
tcccgttctagatcgctctcttcatcttcatctccttcccggagcgtcagttctgggagt
cgcagtcctccacgccgtggaaaaagtcctgctggacctgctaggcgaggtcgctctcct
cctccacaatctaaaggagcctcttcaccttctaagaaagctgctccaactcaagaatct
cttgttctccatattggttctcttagtaggaatgtgaacgaaggccatctgaaagaaatt
tttggcaactttggtgaagttatacatgtggaacttgcgatagatcgagctgttaatctt
ccaagaggacatgcctatgttgagttcaaggcaagagctgatgctgagaaagcgcagctg
ttcatggatggtggccaaattgatggaaatgttgttaaagcaagtttcactctaccacct
cgtcggaaagtatctccaccccctaaacctgtctcaagtgcaccaaagagagatgcatca
aaatctgataatgccagtgctgaaattgagaaagatggtcccaggcgcccaagagataca
tctccgcaacggaaaacagtactttctccaaggaggagatcacctccactgaggagaggc
gcatcacctaggcgattgcctgattctccccctcgccggaggcctggatctcctatccgc
cgtcgtggtggtgatacaccacctagacgcaggccagcatcgccatctagaggccgttct
ccatcttctccccctccaagacgatatagatctcctccaaggggttcccctagaaggatt
cgtggcagtcctgttcgaagacggtctcctcttcctctaaggagaaggtcacctgcaagg
agagtacgcagtcctactctcagaagatccccaatccgcaggcgtagccgatccccaatt
cgtagacctggtcgctctcgttcaaggtccatctcaccccgcaggggacgaggtccagct
gggagacgagggaggtcatcttcttactccagttcaccaagtcccagaaggattcctagg
aaggtttcaagaagccgcagccctagaaggccactgagaggaaaaagaagcagcagtaac
agcagcagcagcagttcaccgccgccacctccacctccacctcgcaaaacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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