KEGG   Camelina sativa (false flax): 104776154
Entry
104776154         CDS       T05044                                 
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csat03016]
    104776154
Enzymes [BR:csat01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     104776154
Transfer RNA biogenesis [BR:csat03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    104776154
 Prokaryotic type
    104776154
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 104776154
NCBI-ProteinID: XP_010498469
Position
3:complement(9237682..9239772)
AA seq 561 aa
MENQEPEIKKFPEEEAPDREPDQKKLKVSTIGHETDSPVPAAGGSNVAEHRKPKYRRRKV
AIVFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPEADRNKPRSYEWARSARTDKGV
SAVGQVVSGRFYVDPPGFVERLNSNLPDQIRVFGYKRVAPSFSSKKFCDRRRYVYLIPVF
ALDPCVHSEAEMVRTDLGYEYVKCVECSEKGYKIPVGVMGKDTDCDSKSLEVQSDISSSN
CDALGTDVKCEALSSSVLNGEDKLNSEVLLDGADVSARVMTEEIPDSSSKADDMEESDTL
AKGEMNNGEGRVMTESNFCYGEKEKERFNRILSYYVGSHNFHNFTTRIKAADPAANRYIL
SFNANTVINLDGKDFVTCEVVGQSFMLHQIRKMIGLAVAVMRNYAPESLIETAFKKDVRI
NVPMAPEVGLYLDECFFTSYNKRFKGSHEEVSMEEYKEVAEEFKWKHVYSHIGSAEEKDG
AVAIWLHSLNQRNYPDLRSNEYKPDEVIVYKKIGEASQQKIHEEKMIVKENSNGIVDKVN
DGTSEGKIMEERITLEENTTG
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggagaatcaggagcctgaaatcaagaaatttcctgaagaagaggctcctgatcgagaa
ccagaccagaagaagctcaaagtttcaacaatcggccatgaaacggattcgccggttccc
gccgccggcggaagcaacgtcgccgagcacagaaagcccaaatacaggcggcggaaagtt
gcaatcgtgtttgcgttttgcggagtagggtatcagggaatgcaaaagaaccccggagcc
aaaaccattgaaggcgagctcgaagaggctttgttccatgccggagccgtacctgaggct
gatcgaaacaagccaagaagttacgagtgggcaagatccgctcgaaccgataagggcgtg
agtgcagtgggccaggtggtttctggtcgtttctatgttgatccgcctggatttgtggag
cggctcaattcgaacctacctgatcagattcgtgtgtttgggtacaagcgtgtggctccg
tcgtttagctccaaaaaattctgtgatcggaggaggtacgtgtatctaatcccagttttt
gctttggatccatgcgtacatagcgaagctgagatggttagaacggatttaggatacgaa
tatgtcaaatgtgtggagtgctctgagaaaggttataagatcccagttggtgttatgggc
aaagacactgattgtgattcaaaatcattggaggttcagtcagacatttcgtcgagcaac
tgtgatgcattaggaactgatgtcaagtgtgaagctttgagctctagtgtacttaatgga
gaagataaattaaactccgaagttcttctagatggggctgatgtatctgctcgtgttatg
acagaggaaatccctgattcaagctctaaagcagatgatatggaagaatcggatactttg
gctaagggagagatgaacaatggggaaggaagagtgatgacagagagcaatttctgttat
ggagagaaggaaaaggagaggtttaatagaatactaagctattatgttggttcacataac
ttccacaacttcaccaccagaataaaagcagcagacccagctgcgaatcgctacattctc
tctttcaacgcaaacactgtgattaacctcgatggaaaagattttgtcacgtgtgaagtt
gttggacagagcttcatgcttcatcaaatccggaaaatgattggacttgctgttgcagtc
atgaggaactatgcacctgaatcactgatcgaaactgccttcaagaaggatgtgagaata
aatgtaccgatggcgccagaagttggattataccttgatgaatgcttcttcacgtcttac
aacaaaaggtttaaaggcagtcatgaagaggtgtcgatggaagagtacaaggaagtagct
gaagagttcaaatggaaacatgtttactcacatattggctcagctgaagaaaaagatgga
gctgtggctatttggttacattcgctgaaccagagaaactatcctgatctacgaagcaat
gaatacaagccggatgaagtcattgtctataagaagattggtgaagcctctcaacagaag
atccatgaagagaaaatgatagtgaaagagaacagtaatggcattgtcgataaggtaaat
gatggaacctctgaaggaaagattatggaagagaggattacactagaagagaacacgacc
gggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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