KEGG   Camelina sativa (false flax): 104791464
Entry
104791464         CDS       T05044                                 
Name
(RefSeq) 30S ribosomal protein 2, chloroplastic
  KO
K13126  polyadenylate-binding protein
Organism
csat  Camelina sativa (false flax)
Pathway
csat03015  mRNA surveillance pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104791464
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104791464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104791464
   03041 Spliceosome [BR:csat03041]
    104791464
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104791464
   mRNA cycle factors
    Stress granule specific factors
     104791464
Spliceosome [BR:csat03041]
 Complex C
  Other components
   Complex C specific factors
    104791464
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 RRM_7 DbpA
Other DBs
NCBI-GeneID: 104791464
NCBI-ProteinID: XP_010515663
Position
6:15033886..15035204
AA seq 253 aa
MATFLTNVVSIKPTVFSFQSESFTPSLTRVNVFSSKSFSSLAGTISRSSRTRFIPYAVME
TEEKAATLDPNSEAARRVYIGNIPRTVNNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFG
FATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDLSLLQSEDSAFVDSPYKVY
VGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAILALNN
SLLEGQKIRVNKA
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcgacttttctaacaaatgttgtttcaatcaaacctacagtgttctcattccagtcc
gaatccttcaccccttcgctaacacgggtcaatgtattctcctcaaaatccttttcttct
ctcgccggaaccatctcccggagctctagaacaaggttcattccttatgcagtaatggag
acagaagaaaaagccgccactttggaccctaattcagaagccgccaggcgtgtctacatc
ggtaacatacccaggaccgtgaacaacgagcagctcaccaaacttgttgaagaacacggt
gctgttgaaaaagttcaggtgatgtatgataagtattcaggacgaagccgccgatttggg
tttgctacaatgaaatcagttgaagatgccaatgctgtggttgagaaattgaatggcaat
accgttgaagggcgtgagataaaggttaacattacagagaaacctatagcatcgtctcct
gatttatcattgcttcagtcagaagattccgcatttgtagatagcccttacaaagtgtat
gttggaaatctagcaaagactgttacaaaagagatgcttgagaatttgttttctgagaaa
gggaaagtagtaagtgccaaggtctcaagagtacctggaacttcgaaatctaccgggttt
ggatttgttacgttctcttcagaagaagatgtggaagctgccattttggctcttaacaac
tctttgctggaaggacagaagattcgggtgaataaggcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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