KEGG   Clostridium saccharobutylicum: CLSA_c42890
Entry
CLSA_c42890       CDS       T02876                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
csb  Clostridium saccharobutylicum
Brite
KEGG Orthology (KO) [BR:csb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csb03009]
    CLSA_c42890
Enzymes [BR:csb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     CLSA_c42890
Ribosome biogenesis [BR:csb03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CLSA_c42890
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Met_10 Methyltransf_25 Cons_hypoth95 PrmA Methyltransf_15 MTS Methyltransf_11 N6_N4_Mtase UPF0020 Methyltransf_12 2-ph_phosp Ubie_methyltran TPMT DNA_ligase_OB Methyltransf_32 PCMT RrnaAD Methyltransf_4 Methyltransf_18 Sec2p Methyltransf_23 Med9
Other DBs
NCBI-ProteinID: AGX45249
UniProt: U5MWR3
Position
complement(4812332..4813696)
AA seq 454 aa
MLEEKKEYIVEVKSLGYEGEGVAKIDGYPIFIPGALKNEKVKVKIVKVKKNYAYGKLIEV
IDRCDERREPDCPNYEKCGGCTLEHLSYNGQLDFKFDRVKDCIRKIAGLDDKLVKYPLGV
KEAYGYRNKVQLPVGLVDGKITIGFFSEKTHEIINVDSCLLLSEEDDNIIEIIRNWMEKY
SILPAKKDGDFYKQGLLRHIMIRKGFKTNEVMIVLVTTDKKINHKDELIDELKLKIKNLK
SVIQNVNHKDTNLVLGEKCTTLWGEDYISDYIGQYKFNISPLSFFQVNPNQTEVLYNKAL
EYADLTGNEIVFDAYCGTGTITLFLSQKAKKVYGVEIVEQAIENAKENAKKNEVTNSEFY
VGKSEEVIPRIIQDGIKPDIIVVDPPRKGCDTKLLNAIGDAKPKRIVYVSCDPSTLARDL
KHLEKLGYETLEVQPVDMFPMTKHIECVAKIEKK
NT seq 1365 nt   +upstreamnt  +downstreamnt
gtgttagaagaaaaaaaggaatatattgtagaggttaaatctttaggatatgaaggtgaa
ggtgttgctaaaatagatgggtatcctatatttataccaggtgcattaaaaaatgaaaaa
gtaaaggttaaaatagttaaagttaagaagaattatgcttatggaaagcttattgaagta
attgatagatgtgatgaaagaagagaaccagattgtcctaattatgaaaaatgtggagga
tgcacattagagcatttaagttataatggtcaattagattttaaatttgacagagttaaa
gattgtataagaaaaattgcaggattggatgataaattagtaaaatatccattaggagtt
aaagaagcatatggatatagaaataaagttcaacttccagttggattagtagatggaaaa
attactataggtttttttagtgaaaaaactcatgagataattaatgtagattcttgctta
cttcttagtgaagaagatgataatataatagaaataataagaaattggatggagaaatat
tctatattaccagccaaaaaggatggagatttctataagcagggcttgcttaggcatata
atgataagaaagggatttaaaactaatgaagtaatgattgtattagttactacagataag
aaaattaatcataaggatgaattaatagatgaattaaagttaaaaattaaaaacttaaag
agtgtaattcaaaatgtaaatcacaaagatactaatttggttcttggtgaaaaatgtact
acactatggggggaagattatatatctgattatataggacaatataagtttaatatatct
ccattatcattttttcaagttaatccaaatcaaacagaagtactttacaataaagcttta
gaatatgcagatttaactggaaatgaaattgtatttgatgcgtattgtggtacaggtaca
ataacattgtttttatcgcaaaaggctaagaaagtatatggcgttgaaatagtggaacag
gcaatagaaaatgccaaagaaaatgctaagaaaaatgaagtgactaattctgaattttat
gtaggaaaatcagaagaagtaattcctagaattatacaagatggaattaaaccagatata
atagtcgtagatccaccgagaaaaggttgtgatactaaattattgaatgctataggagat
gcaaagccaaaaagaattgtttatgtatcatgtgatccaagtacattggcaagggattta
aaacacttagagaaattaggatatgaaactttagaagttcaaccggttgatatgtttcct
atgacaaaacatatagaatgtgttgcaaagatagaaaaaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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