KEGG   Cynoglossus semilaevis (tongue sole): 103380903
Entry
103380903         CDS       T04866                                 
Symbol
trim9
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9 isoform X2
  KO
K10649  tripartite motif-containing protein 9/67
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103380903 (trim9)
   04121 Ubiquitin system [BR:csem04121]
    103380903 (trim9)
Membrane trafficking [BR:csem04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    103380903 (trim9)
Ubiquitin system [BR:csem04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103380903 (trim9)
SSDB
Motif
Pfam: SPRY fn3 zf-B_box zf-C3HC4_4 zf-RING_UBOX PRY zf-C3HC4_3 zf-RING_5 zf-RING_2
Other DBs
NCBI-GeneID: 103380903
NCBI-ProteinID: XP_016886214
UniProt: A0A3P8VH01
Position
1:14937011..14970771
AA seq 729 aa
MDEMEEELKCPVCGSFFREPIILPCSHNICLACARNILVQTPDAESPQSSRASGSGVSDY
DYLDLDKMSLYSEADSGYGSYGGFVSTPTTPCQKSPNGVRVFPPTVPQPPAQQHLLPQPS
SLPLIPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVVDRYQQSKAAALKCQLCEKSP
KEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRISRRASPRKISTCTEHELE
NLSMYCVQCKNPVCYQCLEEGKHGTHEVKALGAMWKLHKGQLSQALNGLSDRATEAKEFL
VQLRNMVQHIQENGVEFEACLVAQCDALIDALNRRKTQLLTQVNKEHEHKLKVVRDQISH
CTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHMTEGQWGKGTLTPRMTSDFDL
TLDSGPLLQTIHQLDFVQMKVPAAPMLQLEECCTQNNSATLSWKQPPLSTIGVDGYILEL
DDGNGGPFREVYVGTETICTVDGLHFNSTYKSRVKAFNSSGVGQYSKTLIMQTSETGLPP
CDIQSIASVAWFTFDPASAHPDIIFSNDNLTVTCSSYDDRVVMCNSAFSRGVHYWEMTVD
RYDNHPDPAFGIARGDVLKDVMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTDGGVSKGAT
IGVLLDFTRRILIFLINDEQQGPVAFEGLEGSYYPAISLNRNVQVTLHTGLPIPDFYTPG
EGDPNGSVC
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggatgagatggaggaagagttaaaatgcccagtttgcggctcgtttttccgggagccc
atcattctgccgtgctcccacaacatttgtttggcttgtgctcggaacatcctggtgcaa
acccccgacgccgagtctccacagagcagcagagcctccggctccggcgtctccgactat
gactacctggatttggataaaatgagcctgtacagtgaggcggacagtgggtacgggtcc
tacggggggtttgtgagcaccccgaccaccccctgccagaaatcaccgaacggggtgcgg
gtgttccccccgaccgtaccacagcctcctgcgcagcagcacctcctccctcagcccagc
tctctgccactgatcccgcgcaactcctgcatcacatgccctcagtgtcaccgcagcctc
atcctggacgaccggggtctccgcggattccccaagaaccgggtgctggagggggtggtg
gaccggtaccagcagagcaaagcggcggcgctcaagtgtcagctgtgtgagaagagtccc
aaagaggccacggtgatgtgcgagcagtgcgacgtcttctactgcgacccctgccgcctg
cggtgccatcctccccgcggaccgctggccaaacaccgcctggtgccgccagctcagggg
cgcattagcagacgcgcgagtccccgcaaaatctccacctgcacggagcacgaactggag
aacctgagcatgtactgtgtgcagtgtaagaacccggtgtgttatcagtgtctggaggaa
ggaaaacacgggacacacgaggtgaaagcccttggagccatgtggaaactgcacaaggga
cagttatcgcaggctcttaacggactctcagaccgagccaccgaggccaaggagttcctg
gtccagctgaggaacatggtgcagcacatccaggagaacggcgtagagttcgaggcctgc
ctggtggctcagtgcgacgccctcatcgacgccctgaaccggcgtaagacccagctgcta
acacaagtcaacaaggagcacgagcacaagctcaaggtggtccgggatcagatctcccac
tgcacggtgaagctgcgtcagaccaccgggctgatggagtactgtctggaggtcatcaag
gagaacgaccccagtggtttcctacagatctctgacgctttgatccggagggttcacatg
acggagggtcagtggggaaagggaacgctgacccccaggatgaccagcgactttgacctg
accctggacagcgggcctctcctgcagaccatccaccagctggactttgtccagatgaaa
gtcccagctgctccgatgctccagctcgaggaatgctgcactcagaacaacagtgccaca
ttgtcatggaaacagccacctctctccaccattggcgtggacggatacattctggagctg
gatgatggaaacggagggccgttcagggaagtgtacgtggggacggagaccatctgcact
gtggacgggcttcatttcaacagcacctacaagtccagagtcaaggccttcaattcaagc
ggtgtgggccagtacagcaagacgctgatcatgcagacgtctgaaactggactccctcca
tgtgatatacagtctatagcctcagttgcctggttcaccttcgaccccgcctccgctcac
ccggacatcatcttctccaacgacaacctgacggtgacgtgcagcagctacgacgacaga
gttgtcatgtgtaactccgccttctcccgtggagtccactactgggagatgaccgtcgac
cgctacgacaaccacccagacccggcgtttgggatcgcgagaggggacgtcctgaaggat
gtgatgctggggaaggatgacaaggcctgggccatgtatgtggacaacaacaggtcctgg
ttcatgcacaacaactcccacaccaacaggacggacggtggcgtcagtaagggggccacc
ataggagttctgctggacttcacacgcaggatcctcatcttcctcatcaatgatgagcag
cagggtccagtggccttcgaagggttggaaggaagttattaccctgcgatcagcctcaac
agaaatgtccaggttacactacatactggactccccatccctgatttctacacccccgga
gagggagatcccaacggctccgtgtgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (37)   

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