KEGG   Cynoglossus semilaevis (tongue sole): 103382343
Entry
103382343         CDS       T04866                                 
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
  KO
K11855  ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:csem01002]
    103382343 (usp42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csem04121]
    103382343 (usp42)
Enzymes [BR:csem01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103382343 (usp42)
Peptidases and inhibitors [BR:csem01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103382343 (usp42)
Ubiquitin system [BR:csem04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103382343 (usp42)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 103382343
NCBI-ProteinID: XP_008313326
UniProt: A0A3P8UCY5
Position
8:13219990..13230579
AA seq 1191 aa
MMTIVDRSSDKSDYQSVGFKRSPFNSRDLAMDGSCSSSWVVGPTMPSDSQRLRAPGSCLG
PTPGAAVYNSTPSSVDRPKEQVMHSGDGIESPQRVLFPLEKLSLKWTQIHRVGAGLQNMG
NTCFLNSALQCLTYIPPFANYMLTREHSKTCHEPGFCMMCTMQNHITQVFANSGNVIKPI
GVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGPKLDRQTQATTFIHQVFGGYL
RSRVKCLNCKAVSDTFDPFLDIALEIKMAPSITKALELFVEPEQLDGENAYKCSKCKKMV
TASKRFTIHRNPNVLTLALKRFANFTGGKITKDVKYPEYLDLRPFMSQSQGESQVYALYA
VLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNCSEQAYVLFYVKSSDVK
KAGDYSHVSVHSGVPGHSSPRPVATPRINTAVHHHNNNNNSGFIGPQLPPHMTKSTLHVN
GNGSLSDYPSSSKSSSTSGKPSHGPPSSSTVSHSISRPSIIPDQDKRQKLSFFIGHNKQN
RSSSSASSSSSSSSSSTSSHSHPPSFSSSSSSSSCSNFSSSQSTSNVQFVPRQLNHTNGV
SCSNGGHHAAGNGSSLLVPYSQESSEDSDQEISGTVDKSSSKLNGKNGRGGIFEKSPQPK
ELGVNHIGNGFNGSMNGVSKLGQNGNHCGQHKINGHTSSFEQISATLSSAALSSSTDADA
DYNQPSKETSNSSRSQGLQSAASESQHLSTFPRAKPVSEPPPQHTGSSTVSVSPSASATV
TGTHSVPSSPPTHNGNPAALTTSSDDGTPATPQKVNGAASKAKDPPQTNGSSEGTEGQEV
TKEQLHSKSGFRSSERRSSRDRDRLNSEKSRDRERHYRDRSHNRDSDGDRYYHRRDYRDQ
RNHYRSNKVRWPSHSRHTRDDDRYNKDDRYYRDEYYHSSQTYYHPRERDRDRCAHHYHYE
KPREDWDSDRRGRGYSHYEECRSSGRLCDDGRESRVLHEKSNGRASERLKGSPPRGHTAS
RSAPNSDDHDHKRTGECRSKDSDYMSEARYCKKTKKSKKKKKSKDKDRSYSSSETDSDKS
DTTRKKKKKSKRQWDSQSPGAKRSRRSKSREQREWEREKESCSRRYHNDSDGFSPTKWQH
MDNADASSDHPPASHSGISNGSTYPNLNGHTGNGYIRTNGNTHKFSSGLKH
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgatgaccatagttgacagatcttcagataagtctgactaccagtcagtgggctttaag
cggtcccccttcaacagtagagatttggcaatggatgggagctgttctagcagctgggtg
gtgggacccaccatgcccagtgactctcagaggctgagggctccaggcagttgtctgggt
ccaacacctggagctgctgtctacaatagtactccttcctctgtggacagacccaaggag
caagtgatgcatagtggtgatggcatcgagtcacctcagagggtcctgttccctctggag
aagctcagcctgaagtggacacagattcatcgtgtgggtgcaggtctgcagaacatgggg
aacacctgcttcctcaattcagccctgcagtgtctgacctacatcccaccgtttgctaac
tacatgctgacacgggagcactctaaaacatgtcatgagcctggcttctgtatgatgtgc
accatgcaaaaccacattacccaagtgtttgcaaattctggaaatgtcattaagcccatc
ggtgtgctcaatgaactcaaaaggatagcaaagcacttccgctacggaagccaagaggat
gcccacgagttcctgcggtacacggtggatgctatgcaaaagtcctgtttacctggaccc
aaattggacaggcaaacacaggcaactacttttatccaccaagtgtttggtgggtacctt
cggtccagagttaaatgtttaaactgcaaagcggtttctgacacatttgacccctttttg
gatattgctctagaaataaagatggctcccagcatcaccaaagctctggagctgtttgtc
gagccagaacagctggatggtgaaaatgcctacaagtgctcaaagtgcaaaaaaatggtg
acagcctcaaagagatttaccatccaccgcaaccctaatgtcctcaccctcgcacttaag
cgttttgcaaatttcaccggaggcaaaattacaaaggatgtgaagtatccagagtatcta
gatctacgtcccttcatgtctcagtcccagggagagtcccaggtttacgctctgtacgct
gtgctggtccactctgggttcagctgtcatgctggacattacttctgctatattaaggcg
agtaatggccagtggtatcaaatgaacgactcctccgtgtctgtcagcgatatcaggtct
gttctgaactgttctgagcaggcctacgtcctcttctacgtcaaatccagtgatgtgaaa
aaagcaggcgactacagccatgtgagtgtccactcaggagtgcccggtcactcctctcca
cggcctgtggcgacaccacgcatcaacaccgccgtccaccaccacaacaacaacaacaac
agtggctttattggtccacagctgccccctcacatgactaagagtacactccatgtgaat
gggaatggatctctgagtgactatccttccagctccaagtccagcagcaccagtgggaaa
cccagtcatggaccaccctcttcctccaccgtctcccactccatcagtcgtccctcaata
atccccgaccaggacaaacgccagaagctctcattcttcattggacataacaagcagaac
cgctcgtcttcttcggcctcgtcctcttccagttcctcttcttcctccacatcttctcac
agtcatccaccttccttctcctcctccagcagcagctcctcctgcagcaacttttcctcc
tcacagtctacctcaaatgttcagtttgttcctcgtcagctgaaccacactaatggcgtg
tcgtgcagtaatggaggtcaccacgctgcaggaaacggatcatcacttctggttccctat
agtcaggaatcctcagaggattctgatcaggagatcagtggcactgtggacaaaagttcc
tcaaagttgaatggaaagaacgggagagggggtatctttgaaaagtctccacagccaaag
gaattgggagttaaccatataggaaatggattcaatgggtcaatgaacggagtctcaaag
ttaggacaaaatggaaaccattgtggacagcataaaatcaatggacacacctcatccttt
gagcagatttctgccactctgtcctcagctgctttgtcttcttccactgatgctgatgcc
gattataaccaaccaagtaaagaaaccagtaattcatccaggtcccagggcctccagtct
gctgccagtgaaagccagcacctgtccacttttccaagggctaaacctgtatctgaacct
ccgcctcagcacacaggatcctccaccgtcagtgtctcaccttcagcctctgctacagtc
acaggcacccactctgttccatcatctcctccaactcacaacggcaaccctgcggcctta
acaacatcatcagacgatggaactcctgctactccacaaaaggttaacggagctgcgagt
aaggccaaagatccaccacagacaaatggatcctcagaaggcaccgaaggacaagaggtc
accaaggagcagctccattccaagtccggtttccgaagcagcgagagacgtagttctcga
gacagagacagactgaactctgagaagagcagagacagggagagacattacagggacagg
agtcacaacagagacagtgacggggatcgctactatcacaggcgtgactacagagatcag
cgcaaccactaccgctcaaacaaagtccgatggccttctcacagtcgacacactagggat
gacgatcgttacaacaaggacgaccgctactacagggacgagtattatcattcttcacag
acttactaccatcccagggaacgggaccgggacaggtgtgctcaccattatcattatgaa
aaacccagagaggactgggacagtgacaggagggggcgggggtattcccattatgaggag
tgtcgcagctcaggacgcttgtgcgacgacggtcgggagtctcgggtgctccatgaaaag
agcaacggcagggcgtcagaaaggttgaagggatcacctccccggggtcacactgcatct
agatcagcaccgaactcagatgaccatgatcacaagaggacgggtgaatgtcggagcaaa
gacagtgactacatgtcggaggcccgttactgtaaaaaaacaaaaaagagcaagaaaaag
aagaagtcaaaggataaagacaggagctacagcagctctgagacagattcagacaaatct
gacactacaagaaagaaaaagaagaaaagcaagaggcagtgggacagccagagcccagga
gccaaacggagccgcaggagtaagagcagggagcaaagagagtgggagcgggagaaggag
agctgcagcagacgttaccacaacgacagcgacggcttttctcccacaaagtggcagcac
atggacaatgctgatgccagcagtgaccaccctcctgcctcccactctggaataagcaac
ggttcaacttaccccaacctcaacggccacacaggaaacggttacattcgaaccaacggt
aacacccacaaattctccagtggcctgaaacactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (82)   
   KEGG ORTHOLOGY (1)   
   RefGene (78)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (103)   

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