KEGG   Cylindrospermum stagnale: Cylst_2147
Entry
Cylst_2147        CDS       T02398                                 
Name
(GenBank) DNA polymerase III, gamma/tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
csg  Cylindrospermum stagnale
Pathway
csg03030  DNA replication
csg03430  Mismatch repair
csg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cylst_2147
   03430 Mismatch repair
    Cylst_2147
   03440 Homologous recombination
    Cylst_2147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csg03032]
    Cylst_2147
   03400 DNA repair and recombination proteins [BR:csg03400]
    Cylst_2147
Enzymes [BR:csg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Cylst_2147
DNA replication proteins [BR:csg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Cylst_2147
DNA repair and recombination proteins [BR:csg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Cylst_2147
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 Intein_splicing AAA RuvB_N AAA_22 AAA_16 PT-HINT DNA_pol3_delta AAA_11 AAA_18 DNA_pol3_delta_C AAA_28 Herpes_Helicase DUF815
Other DBs
NCBI-ProteinID: AFZ24384
UniProt: K9WX40
Position
2518855..2521467
AA seq 870 aa
MSYEPLHHKYRPKSFAELVGQEAIATTLTNAIASAKIAPAYLFTGPRGTGKTSSARILAK
SLNCLKGDKPTADPCGICDVCQGITKGYSTDVIEIDAASNTGVDNIRELIERAQFAPMQC
RYKVYVIDECLTGDSLVLTNEGLVRIDDPNIKGSKVLSYNDSLDKWEFKQVVRWLDQGER
QTLVIKTTNREIRCTGNHLIRTDQGWIPAKAVKEGVKILSPANVDAALSFTNLVSMDEPG
DLLADTSLKAIPTGKKPTTLNLSLNKLNYSDLSVLADVGKSLIGWQTSNNIPSPQWITSL
EVVESVHLAGVEQVYDIEVEDNHNFVANGLLVHNCHMLSTQAFNALLKTLEEPPKHVVFV
LATTDPQRVLPTIISRCQRFDFRRIQIEAMVKHLSAIAKIENIQIAAEAVTLIAQISQGG
LRDAESLLDQLALLSGEVSPDSVWDLVGSVSERDLLELLSAIAQDHAEVVLDYTRKILDR
GREPLTILQNLAAFYRDLLIAKTAPNRHDLVACTQQTWTALVELAQKLDMKIILAGQQHL
RTAEVQIKNTTQPRLWLEVTLLGLLPSATNIQPQTPSISQRVNTPAVSSSYPPAVAQNHQ
VAASLTNYPPTNHNPPAVAQNHQVSATPTNQNLAANSVSPPTPEPVSVPVPPAIIEPVIP
VLPSTEYTQVWQQVRGNIQQFSTQALLGQMCHLIEFDGAVARIGVQPKWYEKVKSYLPII
TAAFQQTFQREVRVNLEQGTAATPTSAKTPPPSKDSNRVQQLATPSYERQMPPLTPQPIP
QPIPQPTPQPTPAKIESVATNTGIVQTLPPPQQPLTPVANYQNEEVEGAAKRLAKFFDGQ
IIRLSHDAIDYSETVTVPDSVYESEIDDDW
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgtcttacgaaccgctgcaccacaagtatcgcccaaagagttttgctgaactggtggga
caagaggcgatcgctactaccctcacaaacgcgatcgccagcgcgaaaattgcccctgcc
tatttattcactggccccagaggtacgggtaaaacttctagcgcccggattttggcaaaa
tctcttaattgcctcaaaggtgacaaacctactgctgacccctgcggcatctgtgatgtt
tgtcagggaatcaccaagggctattctacagatgtgattgaaatcgacgctgccagcaac
actggtgtcgataatatccgcgaactgattgaacgggcgcagtttgcccctatgcagtgt
cgctataaggtttatgtgattgatgaatgcctaactggagattccttagttttgactaat
gagggacttgtccgaatcgatgaccctaatatcaaaggatctaaggttcttagttacaat
gactcattagacaagtgggaatttaagcaggttgttcggtggttagaccaaggagaacgg
caaactcttgttatcaagacaactaaccgagaaattagatgtacaggtaatcatttaatc
aggacagaccagggatggataccagcaaaagccgtaaaagaaggagtgaagatactatcc
cctgccaatgtggatgcggcactttcatttacaaatttggtgtcgatggacgaacccgga
gatttgttagcggacaccagtttaaaggcaatacctacgggcaaaaaacctacaaccctg
aatctatccttaaacaagctgaattactccgacctctctgtgcttgcggatgtggggaaa
agcttgattggctggcagacctcaaacaatattccatccccacaatggattacaagtttg
gaagtggtcgaatctgttcacctcgctggagttgagcaagtttacgatattgaagttgag
gataatcataattttgtagctaatgggcttttagtgcataactgccatatgctcagtacc
caggcattcaacgcgctactaaaaactctggaggaaccaccgaaacacgtagtctttgtc
ttggcgacaactgacccacagcgagtattgccgacgattatttctcgctgtcaaaggttc
gattttagacggattcaaatagaggcgatggtcaagcatttaagtgcgatcgctaaaata
gaaaatattcagattgcagcagaagccgtcaccttgatagcccaaatttctcagggagga
ttgcgggatgccgaaagtctacttgaccaattagctttgttatcgggggaagtatcacca
gatagcgtttgggatttagtcggttcggtaagtgaacgggatttgctagaactgttaagt
gcgatcgctcaagatcatgccgaagttgttctggactacacccgcaaaatcctcgaccgt
ggacgagaacctttaactattctccaaaatctcgccgcattctaccgcgatttgctgatt
gctaaaaccgcacctaaccgccacgacttggttgcttgtactcagcaaacttggacagcg
ctggtagagttagcccaaaagttggacatgaaaataattttggctggacagcaacacctg
cgaacagcagaagtgcaaattaaaaacacaacccagccgcgtttgtggttagaggtaaca
ttactcggattgttacccagtgcgacgaatattcaaccacaaaccccaagtatctcacag
cgagtgaacacacctgctgtatcttcaagctatcctccagcagtagcccaaaatcaccaa
gttgctgcatcgctaacaaattatccaccaacaaatcacaatcctccagcagtagcccaa
aatcaccaagtttctgcaacgccaacaaatcaaaatttagcggctaactcagtttcacca
ccaaccccagaacctgtatctgttcctgtcccacctgcaatcattgaaccagtaatccca
gtattaccctcaactgagtacactcaagtttggcaacaggtacgtggcaatatccagcag
ttctccacacaagctttactggggcaaatgtgccatctcattgagtttgatggtgctgtg
gctcgtattggtgttcaacctaagtggtatgaaaaagttaaatcttatctgcctataatt
acagcagctttccagcagaccttccagcgtgaagttcgggtaaatctagaacaaggaact
gctgcaactcctacttcagctaaaacaccccctccatcaaaagactctaatcgcgttcag
cagctagctacacccagctacgaaaggcaaatgccgccgctaacgccacaaccaatacca
caaccgataccacaaccaacaccacaaccaacgccagcaaaaatcgagtcagtggcaact
aatacaggaatcgtgcaaactttgccaccaccgcaacaaccgctaacacccgtagctaat
taccaaaatgaggaagtagaaggtgcagctaaacggctagcaaaatttttcgacggtcaa
atcatccgcctctcccatgatgcaatagattactctgaaactgtcactgtgcctgattca
gtatatgaatcagaaattgatgatgattggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (45)   

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