KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_21073
Entry
COCSUDRAFT_21073  CDS       T02914                                 
Name
(RefSeq) RIO1-domain-containing protein
  KO
K07179  RIO kinase 2 [EC:2.7.11.1]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    COCSUDRAFT_21073
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:csl01001]
    COCSUDRAFT_21073
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_21073
Enzymes [BR:csl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     COCSUDRAFT_21073
Protein kinases [BR:csl01001]
 Serine/threonine kinases: Other
  RIO family [OT]
   COCSUDRAFT_21073
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  Pre-40S particles
   Kinases
    COCSUDRAFT_21073
SSDB
Motif
Pfam: RIO1 Rio2_N APH Kdo Kinase-like TCAD9 ABC1 Pkinase DUF4462
Other DBs
NCBI-GeneID: 17035961
NCBI-ProteinID: XP_005642557
JGI: 21073
UniProt: I0YHZ4
AA seq 335 aa
MKLDVNALRYLSRDESRTLQAVEIGQKNHDIVPVPLVDSIAGLKHGGVVRCLKALLRQKL
VHHDNSRYDGYRLTPLGYDFLALKALVARGAITAVGRQIGVGKESDVFEACPLPGAAAVL
NADGEVLAMKLHRLGRTSFRAVKKKRDYLQHRNSFSWLWLSRLAAAKEFAFMEALGAAGF
PVPRAIEHNRHAVLMSLVDAVPLVQVKLADPGAVYLQLIDMIGDLASRGLVHCDFNEFNI
LVDEQGGVTLIDFPQMVSTSHANAEELFDRDIDCVIRFFNKKLGYVSEQDASLPYLRPDF
KACPHSFSSFAGLVQSYVSSGSGLLVGVNSTPAGT
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaaattggatgtcaatgctcttcgatatttatcgcgggatgaaagcagaacgctgcaa
gccgtcgagatcggccaaaagaaccacgatatcgtccctgtccctctggtggacagcatc
gcaggcctcaagcatgggggcgtggtgcgctgcctgaaggcactgctgcgacagaagcta
gtgcaccatgacaacagccgctacgacggctaccgcctgactcccctcggttacgacttc
ctggcgctcaaagcgttggtcgcgcgcggcgccatcaccgccgtcggccgccagatcggc
gtcggcaaggagtccgatgttttcgaggcatgccccctccctggtgcagccgctgtactg
aacgctgatggcgaggtgctggcgatgaagctgcaccgcctggggcgtacctccttccgg
gcagtcaagaagaagcgcgactacctgcagcacagaaactccttcagctggctgtggctg
tcgagactggcggcggccaaggagtttgcgtttatggaggctctcggagcggccggcttc
ccggtgccgcgcgcgatcgagcacaaccgccacgccgtcctcatgtccctcgttgacgca
gtgccccttgtgcaggtgaaactggcggatcctggggctgtgtatcttcagctgatagac
atgattggggacctggcctcccggggcctcgttcactgcgactttaacgaattcaacatc
ctggtggacgagcagggcggtgtgacgctgatagactttccccagatggtgtcaaccagc
cacgccaatgcagaggagctgtttgatcgcgacatcgactgcgtcatccgcttcttcaac
aagaaacttggctacgtctccgaacaggacgcctccctgccctacctgcgcccagacttc
aaggcgtgcccccattctttcagttcctttgcgggccttgtgcagtcgtatgtatcaagt
ggatcaggtctccttgtgggcgtgaatagcactcctgcaggcacttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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