KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_38711
Entry
COCSUDRAFT_38711  CDS       T02914                                 
Name
(RefSeq) S-adenosyl-L-methionine-dependent methyltransferase
  KO
K15264  25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_38711
Enzymes [BR:csl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.311  25S rRNA (cytosine2278-C5)-methyltransferase
     COCSUDRAFT_38711
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   COCSUDRAFT_38711
SSDB
Motif
Pfam: Methyltr_RsmB-F NSUN5_N NSUN5_fdxn-like Methyltransf_25 Methyltransf_31 ASPP1-2_RA FtsJ ASPP2-like_RA
Other DBs
NCBI-GeneID: 17036197
NCBI-ProteinID: XP_005642834
JGI: 38711
UniProt: I0YIS1
AA seq 453 aa
MGKRKLVSILKRPIPATGLVDRQAASAITHVLHADATGTEGASIKSLTLGPAIQAKKATY
AVTCETLRMLPVIQQLVSTAELMGLDPRLSRETAFVLCYELLFGEGLRQKGPAERLVLSA
RPALEQELAAMLAEAGVANARELISESAQSAAAQRRPRSARVNTLKMSVAEALTWLRTPK
GKQHLKLAELGAQVTQDELLPDVLLFPPATDLHDHPLVKNSCLILQSKASCMPAHALEPQ
PGWDVLDACAAPGNKTTHLAALMEGKGRVLAFDKDPKRLKRLKANAAATGADCITARVAD
FLQLPLATSPEFRNVRGALVDPSCSGSGTTLSRMDFLLPSHAAQHSPRSEGDRIERLARF
QEAVVLHALTLPALQRLVYSTCSVHERENEAVVAAVLPRARELGFELAAPFPGWPRRGLA
SSVEGAERLVRTHAVEDGTDGFFLAVFQRKAES
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgggcaagaggaagcttgtgagcatcctgaaacgacctattcctgccacgggactcgtc
gaccggcaagcggcgtccgccattacacacgtgctgcatgcagacgccaccggcaccgag
ggagcttccatcaagtcgctcaccctcggcccagccatccaggcgaagaaggccacctac
gcagtcacatgcgagacgctccgcatgctccctgtcatccagcagctggtcagcacggca
gagctgatggggctagaccccaggctctcccgggagacggccttcgtgctctgttacgag
ctgctgtttggcgagggcctccggcagaagggccctgcagagcggctagtgctgagcgca
cggccggccctggagcaggagctcgcggcgatgctggctgaagcgggagtggcgaacgcg
cgggagctgatcagcgagtcagcgcagagcgccgccgcgcaacgtcggccgcggtccgcg
cgcgtgaacacgctgaagatgtccgtggcagaggcactgacctggctcaggacgccaaag
gggaagcagcatttgaagctggctgagttgggcgcgcaagtgactcaggatgagctgctg
ccggacgtgctgctcttcccgccggctacggatttgcatgatcacccgcttgtgaagaac
tcctgcctcattctgcagagcaaggcgtcgtgcatgccggcacatgcgctggagcctcag
cctggctgggatgtactggatgcctgtgcagctcccggcaacaagaccacccatcttgca
gcgctgatggaagggaagggccgcgtgctggcgtttgataaggaccccaagcggctgaag
cggctcaaggcaaatgcggctgcaacaggcgcagactgcatcactgcgcgcgtggcagat
ttcctgcagcttcctcttgccacgtccccagaattcaggaatgtgaggggtgcgttggtg
gacccttcgtgcagcggctccggcacaacgctctcgcgcatggacttcctgctgccgtca
catgcagcacagcattctccgaggagcgagggggatcgcatcgagcggctggcgcggttt
caggaggcagtggtccttcacgcgctgacgctgccggcgctgcagcggctggtgtactcc
acttgttcggtgcatgagcgcgaaaacgaggccgtcgtggccgccgtgctgccgcgcgcg
agggagctggggtttgagctggcggcccccttcccgggctggccccggcgcggcttggcc
agcagcgtggagggcgcggagcggctggtgcgcacgcacgccgtcgaggacgggacggat
gggttcttcctggctgtgttccagcgcaaagcggagtcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (38)   

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