KEGG   Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c25900
Entry
Cst_c25900        CDS       T02440                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
css  Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:css00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Cst_c25900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:css03400]
    Cst_c25900
Enzymes [BR:css01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Cst_c25900
DNA repair and recombination proteins [BR:css03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Cst_c25900
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 PIF1 HHH_5 AAA_22 UvrD_C Helicase_RecD ATPase_2 UvrD-helicase HHH_2 AAA_16 T2SSE nSTAND3 PhoH DEAD SLFN-g3_helicase TsaE AAA_28 AAA Hjc NTPase_1 MobB MeaB ABC_tran AAA_18 DUF815 NACHT AAA_29 AAA_14 AAA_24 ATP_bind_1 cobW
Other DBs
NCBI-ProteinID: AGC69540
UniProt: L7VMU1
Position
complement(2784877..2787090)
AA seq 737 aa
MERIEGIVEDIIFCNRDNWYTVCDIRSGRRLITVVGYMPDIAIGETVVVSGTWTVHQDYG
KQLKVETCERVLPTTTDAIYKYLASGIIKGIGETTAKKIVDRFGEDTLRILQFEPQRLSE
IKGISEEKALQIGQAFIEREQMRQIVMFLQKYGISATYAVKVWKKFGNEAVNEIKRNPYR
LTDEDINIGFKIADRVAISMGIDIESEFRIASGIQYALSKAVQDGHVYLPSDVLIPYASR
LLDVSAEAVERVLSGLIFEESVCIEKTPEEDRVYLSPFFKAEQCVARKLAVLSSIGPKKN
ILNLEKLLEEVQEEQRIEYTAEQLEAIRCSATESILVVTGGPGTGKTTLIRGIISIFEKS
GLEIVLAAPTGRAAKRMTEATGKEAKTIHRLLEMEFSVDESYREFRKNERDPIKADAIII
DEMSMVDILLMHSLLKAVEPGTRLILVGDVDQLPSVGPGKVLGDIIESECLKVIRLNTVF
RQAGESSIVINAHRINKGIFPEFSMSEGDFFFIPRSTPKATAQAVLELCTARIPEKFGLD
PMKDIQVLSPSKKGDAGIYNLNALLQQCLNPPESGVREKNFRGVVFRENDRVMQIKNNYN
LPWTMEDKNRKVVSGEGVFNGDMGIIREIDPENDYLTVLFDDGKIVEYSFDMLDELEHSY
AITVHKSQGSEFPAVVVALSGVPPMLRLRNLLYTAITRARQLVVIVGDIEILRQMVNNAT
ERERYTGLKERLIRYFE
NT seq 2214 nt   +upstreamnt  +downstreamnt
ttggagagaatagaaggaattgtggaagatattatattttgcaatagggacaactggtat
accgtatgtgatatacgctcggggagaaggcttataaccgtggtgggttatatgcccgac
attgccattggcgaaacggttgttgtaagcgggacgtggacggtacatcaggactatggg
aaacagctgaaggttgagacctgtgaaagagtgcttccgacgacgaccgatgccatatat
aagtacctcgcgtcgggtataattaagggaattggcgaaacaacggcgaaaaaaattgtt
gacaggttcggcgaggacacgttaaggattttgcagttcgaaccgcagcgcctgtccgag
ataaagggaatcagtgaagagaaggctttacagattggacaggcttttattgaaagggaa
cagatgcggcaaatcgtgatgttccttcagaaatacggaatttcagccacttatgccgta
aaagtatggaaaaagttcggaaatgaagccgttaatgaaataaaacgcaatccataccga
ctgaccgatgaggatataaatatcggatttaaaattgcggaccgtgttgcaatatcgatg
ggaattgatatcgaatccgaattcagaattgccagcggaatccagtacgcgttgtcgaaa
gcggtgcaggacgggcatgtgtatctgccgtccgatgtactgataccatatgcctcaagg
cttctggatgtgtcagccgaagcggtggaaagagtcctgtcaggccttatctttgaagaa
agcgtctgtattgaaaaaacgcccgaggaagacagggtatatctgtccccatttttcaaa
gccgagcagtgcgtggcaaggaaacttgcagttttaagcagcatagggccgaaaaagaat
atattgaatctggaaaagctgcttgaggaagtccaggaagaacagcgtattgaatacacc
gcagaacagcttgaggcaatacgctgttcggccacggaaagcatactggttgttaccggc
ggccccggaacgggtaaaaccacgcttataaggggtattatatcgatatttgaaaaaagc
ggcctggaaattgttttagcggcacctaccgggagggcggcaaaaaggatgaccgaggcc
acgggcaaagaggcaaaaaccattcaccgccttcttgagatggagttctcagtggatgaa
agctacagggaattcaggaagaatgagcgggatccgataaaggccgatgccataattata
gacgaaatgtcaatggttgacattctgcttatgcattcgttgcttaaggcggttgaaccc
ggtacaaggcttattctggtcggagacgtggaccagcttccgtcggtgggaccgggaaag
gtactgggcgacataattgaaagcgaatgccttaaagtcatacggttaaacacggttttc
aggcaggccggtgaaagttccatcgtcattaacgcccacaggataaacaaaggtatcttt
ccggaatttagtatgtccgaaggagattttttctttatcccgagaagcacgccgaaagca
acggcacaggccgtactggagctatgcacggctcggattcctgagaaattcggcctggac
ccgatgaaagacatccaggtgctgtcgccgtcgaaaaaaggtgatgcggggatttacaac
ctgaacgctctgttgcagcagtgcctgaacccgccggaatcaggagtgagggaaaaaaac
ttcaggggcgtggttttcagggaaaatgacagggtaatgcagataaagaataactacaat
ttgccatggacgatggaggacaaaaaccgaaaggttgtaagcggtgaaggcgtattcaac
ggagatatgggcataatccgggaaattgacccggaaaatgattatttgactgtcctgttt
gatgacgggaaaattgtggaatacagtttcgacatgctggatgaactggagcattcatat
gcgattaccgttcacaaaagccagggaagtgagttccccgcggtggttgtagcgctgtcg
ggcgtcccgccgatgctgcggttaagaaaccttttatacaccgcaataaccagagcgcgg
cagcttgtagtaatcgtaggcgatattgaaatactgaggcagatggttaataacgctacc
gaaagggagaggtatacagggctgaaagaaaggctgatacggtattttgaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (37)   
   Pfam (37)   
All databases (47)   

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