KEGG   Colius striatus (speckled mousebird): 104560073
Entry
104560073         CDS       T08355                                 
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
csti  Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:csti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csti03016]
    104560073 (TRUB1)
Enzymes [BR:csti01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     104560073 (TRUB1)
Transfer RNA biogenesis [BR:csti03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    104560073 (TRUB1)
 Prokaryotic type
    104560073 (TRUB1)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Pus10_C DMA
Other DBs
NCBI-GeneID: 104560073
NCBI-ProteinID: XP_010203592
Position
Unknown
AA seq 198 aa
MLKTMLAGSKKYTAIGLLGKATDTLDATGKVTEEKPYDQITKGDLENVLQKFTGDIMQVP
PLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYSLSLQHFQPPLFTLDVECGGGFYVRS
LVSDIGKELSTCATMQELTRTKQGPFTLEEHALYEDKWTIDEIARSLEHCTSLLPGELSH
KRLKTEHPGETAVSCEDK
NT seq 597 nt   +upstreamnt  +downstreamnt
atgctgaaaactatgttggcaggttccaagaagtacactgccattggactgctgggcaaa
gctactgatacattagatgctacaggaaaagtaactgaagaaaaaccttatgaccagata
acaaaaggagatcttgaaaatgtgctgcagaagttcacaggagacataatgcaggttcct
ccactctattctgctttgaagaaggatggagaaaggctgtcaactctgatgaagagagga
gaagcagttgaagcaaagcctgctcggccagtaagagtgtacagcctctctctccaacac
ttccagccaccactcttcacgctggatgttgaatgtggtggtggcttttacgtcaggagc
ctggtcagtgacattggcaaagaactctctacgtgtgccaccatgcaggagctgacccgg
acgaagcaggggccgtttacgctagaggagcatgccctttatgaagacaaatggacaatt
gatgaaattgcacgatccttagagcattgcacatctcttctcccaggagagctatctcat
aaaagattgaagacagagcatcctggtgaaactgctgtgagctgtgaagataagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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