KEGG   Cucumis sativus (cucumber): 101211067
Entry
101211067         CDS       T02486                                 
Name
(RefSeq) nuclear pore complex protein NUP54
  KO
K14308  nuclear pore complex protein Nup54
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101211067
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101211067
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101211067
SSDB
Motif
Pfam: Nup54
Other DBs
NCBI-GeneID: 101211067
NCBI-ProteinID: XP_004135312
UniProt: A0A0A0KPW8
Position
5:24951681..24956055
AA seq 389 aa
MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS
TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTAPQSTPFPNAQ
LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDI
MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ
RHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAI
ARLGNVLKRDVRDMEIIMAEDKEMADDAS
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgttcggagctcaaccgtcctcctccgccttcggcactccacaatcaagtccggccttt
ggcactccgcaatcaactccggcatttggcacgccggcgtccactcctgcctttggaact
ccatcggcgtctcctgcatttggcaatctttcctcaactcctgccttcggaactccatct
acgtcgtcgtttgctaccggcttcggctcctctctcttctctactccattctcttctcag
ccttcacaacagcaacagcagttgcagcaatcgccgatgtttccgcaatcatccgctaca
ggattcggtttccagactccgtttactgcgcctcagtccactccatttccaaatgctcaa
ctgaccactcaaatggctccggtcgcaccgcttcctttctccctggcagatcgagatatt
caagcaattgttgaggcttacaaggacgacgctggaaaccctaagtatgctttcaagcat
ttgttgttcagtgtaactgatcctcagtataggacgaagcctcctggtgtatcggatata
atgtgggctgaggcaatggcaaagctcgaaggcatggaaagtgctgatagagagcgattg
tggccgcagcttgttcaaggttttaaggatttatctcagcgcttgaagattcaagatgaa
gtcattctctctgattccgagagactacgaatgacccaaagcaatgtcaaaatgcttcag
aggcattttctagccgatactctaccttgggttcaaagattgaaacagaaggagcaaggt
ctgcaaaggcatctgttgagagttatgagaattgtggaggcactagaaagtaaaggttgc
cgagtgcctgtaatgaaaggagaggctgaattggcagagaagttagccttgataacgagg
cagttgaaaggctctggggcagaactttcaaggagggtacaaaatttgctgacagttact
cgtgggcaagcaaacggctccggtcctggtaattccatctattttcaaggatctgcaaaa
atacacgagcagagtcttgccgatatgcaggaggttttacagcagcagactgaggccatt
gctagacttggaaatgttttaaagcgagatgttagagacatggaaatcataatggctgaa
gataaagagatggcagatgatgcaagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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