KEGG   Cucumis sativus (cucumber): 101217384
Entry
101217384         CDS       T02486                                 
Name
(RefSeq) RNA-binding protein 28
  KO
K14573  nucleolar protein 4
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101217384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csv03009]
    101217384
Ribosome biogenesis [BR:csv03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    101217384
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 101217384
NCBI-ProteinID: XP_004148553
Position
7:309074..324853
AA seq 966 aa
MGKNRRLKDGADKGAAAGDHCPSTVFVNNFPYSFTNSQLEETFSDVGPVRRCFMVTQKGS
TEHRGFGFVQFAVAEDANRAIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKENQVAGSTL
AANEEGDTSKMEEHPTTKDKGTSKRDVQPINEERDTSKRAEQTISNSEGKERHLSARKLA
PLSSYLEDKEGHSGKQRIARTVVIGGLLDGDMAEDVHRQVRDVGGVCSIVYPLPRKEVEQ
HGILRDGCKMDVSAVLFDSVKSARAAVAILHQKEMKGGVVWARQLGGEGSKTQKWKVIVR
NLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFVKFTCKQDAESAIQKFNGKK
FGQRTIAVDWAVPKKIYSSGGGATAPVDSDDEDQTERDREGSISGSDSRDENTGHNESES
SSEDSEKEDISSEVDFEGETEIARKVLETLISSSAKEALPSLTDGNPPSKVNKEPDFDSS
KKSSDMSDKVSNEPGKLSESKTSILKQTDEEDLKRTVYIGNLPFDIDNEEVKQRFSGFGE
VLSFVPVLHQVTKRPKGTGFLKFKTADAANVAVSSANAASGVGIFLKGRQLKVLNALDKK
SAQDKELEKSKNDNHDHRNLYLAQEGIILEGTPAAEGVSASDMEKRQRLEKKRTTKLQSP
NFHVSRTRLVIHNLPKSMKEKELHKLCIEAVTSRATKQKPVIRQIKFLKDVKKGKMLTKN
HSCGVAFIEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQAWSQ
DNNIANIPKARQRKDDSDTNARDIHSNENNSRKRKAIGNNHLVKAQNRNEDENDNHVSNN
VMQDNRDRKKRKTRPDFGNTNESQKQKPGRSSMPEKSSKRPASMDSEKKIEVSQEADVQH
KKKVKHQVEQQQRKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLQQRSDRTDGEKKGTKQV
RRWFQS
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgggaaagaacagaaggcttaaggacggcgccgataagggagccgccgccggcgaccac
tgcccttccacagtctttgtcaacaacttcccgtactcgttcaccaactcacagcttgaa
gaaacattcagtgatgttggaccggtccggcggtgcttcatggttacccaaaagggttca
accgagcatcgtggttttggattcgtgcagtttgctgtagcagaagatgcaaatcgagca
attcagctgaaaaatggactgtcttttgaaggacgcaaaattactgtcaaacatgctatg
catcgagctccccttgagcagagacggtcaaaagaaaatcaagttgctggatctacacta
gcagctaacgaggaaggagatacttctaaaatggaagaacatccaactaccaaggataaa
ggaacttctaaaagggatgtacaaccaatcaatgaggaacgagatacttctaaaagggca
gaacaaacaatttcaaattctgaggggaaagagagacatttgagtgctagaaaattagct
ccactttctagttatctagaggataaagagggtcattcaggaaagcaaaggattgcacgg
actgttgtcattggcggtcttcttgatggtgatatggctgaagatgttcaccgccaagtg
agagatgttggtggcgtatgctcaattgtctatcctcttcccagaaaagaagttgaacaa
catggtattttacgagatggatgcaaaatggatgtctctgctgtactttttgatagtgtg
aagtctgcacgtgctgctgttgctatattacaccagaaagagatgaaaggaggtgttgta
tgggctcgccaactgggtggggaggggtccaaaactcagaaatggaaagttattgttaga
aatcttccatttaaggccaaggagaaagaaataaagaataccttttcatctgcgggattt
gtgtgggatgtgatgatgccacaaaattcagacactggattatcaaaggggtttgcgttt
gtcaaatttacatgcaagcaggatgctgagagtgctattcaaaagttcaatggtaaaaaa
tttggtcaaaggacgatagctgtggactgggctgttccaaagaagatatatagttctggt
ggtggtgctactgctccagttgattcagatgacgaggatcagactgaaagagacagagaa
ggtagcattagtggtagtgattccagagatgaaaatactggtcataacgaatctgaaagt
tcttcagaggattcggagaaagaggatatttcctcggaggttgattttgaaggagaaaca
gaaattgcaagaaaagttcttgaaactctaatttcatcttcggctaaagaggctcttcct
tctctcactgatggtaacccaccatctaaagtgaacaaggagccagattttgattcatcc
aagaaatcatccgatatgtctgataaagtatcaaatgaacctggaaagttaagtgaaagc
aagacatctattcttaagcaaacagatgaagaagatttgaagagaacggtttatataggc
aatcttccttttgatattgataatgaagaagtgaaacagcggttttctggattcggtgaa
gtattatcctttgtgccagtccttcatcaagttacaaagcgacctaaaggcactggtttt
ctcaagtttaaaaccgcagatgctgctaatgttgctgtttcttctgcaaatgctgcatct
ggtgtgggaatatttctgaaaggcaggcaactgaaagtattgaatgccttggataagaaa
tcagctcaagacaaggaattggagaagtcaaaaaatgacaatcatgaccaccggaatctt
taccttgcacaggaaggtattattctcgagggaactccagctgctgaaggagtttctgct
agcgacatggagaaacgtcaaaggctggaaaagaaaagaacaaccaagcttcaatctcca
aattttcatgtttcaaggactaggctcgttatacataacttaccaaaatcaatgaaagaa
aaagaacttcacaaactttgcattgaagctgttacctctcgagctacgaagcaaaagccc
gtgattcgccagattaaattcttaaaggatgttaagaaaggaaagatgctgacaaaaaat
cactcatgtggagtcgcttttatcgagttttctgagcatgagcatgcccttgtagccttg
cgagttctcaacaacaatccagaaacttttggccctataaatcgcccaatcgtggagttt
gctattgacaatgttcaaacgctgaagctgcgtaaagccaagttacaagcttggtcgcag
gacaataatattgccaatattcccaaagcaaggcagcgaaaggatgactctgatacaaat
gctagggatatccattcaaacgagaacaattccagaaaaaggaaagcaataggaaataat
catctggtgaaggcacagaatcgtaacgaagatgaaaatgacaatcatgtatccaataat
gtgatgcaagacaatagagacagaaaaaagaggaaaacacgtccagattttggaaataca
aacgagtcacagaaacaaaaaccaggacgaagttcgatgcctgaaaaatcaagcaagaga
ccggcatccatggattctgaaaagaaaatagaagtttcccaggaagctgatgtacaacac
aaaaagaaggtaaaacatcaagtagagcagcagcagaggaagaggccaaagaaaaacaag
gaaccaataggacgggatattgtagataaactcgatgtgcttatcgaacaatatcaatcc
aagtttttgcagcaaaggtcagaccgaacggatggtgaaaagaaagggactaaacaggtt
agaagatggttccaatcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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