KEGG   Carlito syrichta (Philippine tarsier): 103259472
Entry
103259472         CDS       T07836                                 
Symbol
PTCD1
Name
(RefSeq) pentatricopeptide repeat-containing protein 1, mitochondrial
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
csyr  Carlito syrichta (Philippine tarsier)
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csyr03016]
    103259472 (PTCD1)
   03029 Mitochondrial biogenesis [BR:csyr03029]
    103259472 (PTCD1)
Transfer RNA biogenesis [BR:csyr03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    103259472 (PTCD1)
Mitochondrial biogenesis [BR:csyr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    103259472 (PTCD1)
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR PPR_1 DUF5546 MNE1
Other DBs
NCBI-GeneID: 103259472
NCBI-ProteinID: XP_021567528
Ensembl: ENSTSYG00000029495
UniProt: A0A3Q0E0L5
Position
Unknown
AA seq 704 aa
MDLVRLTRLFSSPRLMGLSILQHLGPLRAMWAGGKEGPMWLTQPVSVAFSSSLSQLLLSQ
ESQKNTRNLSSDPSQPSHTATQEEEEEESFGTLSDKYSSRRLFHKSTAQFYNLRLREQSV
EDDEEKELEPKSWRGPKNTPYWYFLQCKHLIKEGKLAEALDLFERQMLKEERLQPLESNY
TVLIGGCGRAGYLKKAFRLYNDMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQ
QLQARNFQLNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHAVTEETFNFLLMGCIQDK
ETGFRYALQVWQQMLSLGLKPSRHSYNLMLGAARDCGLGDPQVASELLLRPREEAVLLQS
PAGRRRARRTAQTGASDCMLARLHVEALERQLFLGPSQALEGHPEPREARVPIKDQPEVE
TEAEPNHSVAFTPVALKPPSLELEVNLLTLGTVPPAVISFGMVTTPADRLALMGGLEGFL
GRMAEHRLQPDIRTLTLLAEVVEPASPAEASLLTILDKHQVEADVTFFNTLVRKKSKLGD
LEGAKALLLLLAKRGIVPNLQTFCNLAIGCCRPKDGLQLLADLKKSQVTPNIHIYSTLIN
AALKKLDYTYLINILKDMRQNRVPANEVVIRQLEFAAEYPPTFDRYKGKNTYLEKIDGFR
AYYKQWLKVMPAEETPHPWQKFRTKPKNREPIREADVDGDLGGR
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggaccttgtgagactcacccgactcttctctagccctcgcctcatggggctgtccatc
ctgcaacacctaggcccactcagagccatgtgggcaggaggcaaggagggccccatgtgg
ctgactcagcccgtgtcagtagccttcagtagctccctctctcaactgcttctcagccag
gagagccaaaagaacactagaaatctcagctctgacccaagccagcccagccacacggcc
actcaggaggaagaggaagaggagagttttgggaccctctctgacaaatactcttcccgg
agactgttccacaaatcgacagcccagttctataacctaaggctcagggaacagagtgtc
gaggatgacgaggaaaaggaactggaacccaaatcctggcggggtccaaaaaacacccca
tactggtactttcttcagtgcaaacacctgatcaaggaagggaagctggccgaagccctg
gacctatttgagagacagatgctgaaggaggagcgactccagccgctggagagcaactac
acggtgctgatcgggggctgcgggcgggctggctacttgaagaaggccttccggctctac
aacgacatgaaaaaacgggacctggaaccctcagatgccacatacacagccttgttcaac
gtctgtgctgagtccccctggaaggattctgctctgcagagcgccctgaagctccggcag
cagctccaggccagaaacttccagctcaacttgaaaacctaccacgcactgctgaagatg
gctgccaagtgcgcagacctcaggatgtgcctcgatgtgttcaaggaaatcatccacaaa
gggcacgcggtcacagaggagaccttcaacttcctgctcatgggctgcatccaggacaag
gagacaggcttccgatacgctctgcaggtgtggcagcagatgctgagtctggggctcaag
ccaagccggcacagctacaacctgatgttgggggcagctcgggactgtggcctgggggat
ccccaggtggcctcagagctgctcctgaggcccagggaggaggcagtcctgcttcagtcc
ccagcaggcaggcggcgggcaaggagaacagcccagactggggccagtgactgcatgttg
gccaggctgcacgtggaggccctggagaggcagttgtttctgggaccttctcaggcactt
gaggggcatccagagcctcgagaagccagagtgcccatcaaggaccagcctgaagtggaa
actgaggctgagcccaaccattcagtggccttcaccccagtggccctgaagccaccttcg
ttggagctggaggtcaacctcctgacccttgggactgtacccccggctgtgatctccttt
gggatggtgaccactccagctgacaggctggccttgatggggggcctggagggcttcctg
ggcaggatggcagagcacagactccagcccgacatcaggaccctcaccctgctcgctgag
gtagtggagcccgcgagccctgcagaggcctcgttgctgaccatcctggacaaacaccag
gtggaggccgatgtgacgtttttcaacacgcttgtgagaaaaaagagcaagctgggagac
ctggagggagcaaaggcactgttgctactcctggcaaagagggggatcgtccccaatctg
cagaccttctgtaacctagccattgggtgttgcaggccaaaggatggtctgcaactgctc
gcagacttgaagaagtcccaggtgactcccaacatccacatctacagcacccttatcaat
gcggccctcaagaagctagactacacctatcttatcaacatcctgaaggacatgaggcag
aacagggtcccggcgaacgaagtggtcatccgccaactggagtttgcagctgagtaccct
cctacgtttgaccggtacaaagggaagaacacctacctggagaagatcgatggcttccga
gcctattacaagcagtggctgaaagtgatgccggcagaggaaaccccccacccctggcag
aagttccggaccaagcccaagaaccgagaacccatcagggaggctgatgtggatggagac
cttggaggcaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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