KEGG   Chlamydia trachomatis 434/Bu: CTL0567
Entry
CTL0567           CDS       T00645                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ctb  Chlamydia trachomatis 434/Bu
Pathway
ctb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ctb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CTL0567 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctb03021]
    CTL0567 (rpoB)
   03400 DNA repair and recombination proteins [BR:ctb03400]
    CTL0567 (rpoB)
Enzymes [BR:ctb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CTL0567 (rpoB)
Transcription machinery [BR:ctb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CTL0567 (rpoB)
DNA repair and recombination proteins [BR:ctb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CTL0567 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: CAP04007
UniProt: B0B7N1
Position
complement(673171..676929)
AA seq 1252 aa
MFKCPERVSVKKKEDILDLPNLVEVQIKSYKQFLQIGKLAEERENIGLEEVFREIFPIKS
YNEATILEYLSYNLGVPKYSPEECIRRGITYSVTLKVRFRLTDETGIKEEEVYMGTIPIM
TDKGTFIINGAERVVVSQVHRSPGINFEQEKHSKGNVLFSFRIIPYRGSWLEAVFDINDL
IYIHIDRKKRRRKILAMTFIRALGYSTDADIIEEFFSVEERSLRSEKDFVALVGKVLADN
VVDADSSLVYGKAGEKLSTAMLKRILDTGVQSLKIAVGADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDAKRYNLGRVGRYKLNKKLGFPLDDETLSQVT
LRKEDVIGALKYLIRLRMGDEKTSIDDIDHLANRRVRSVGELIQNHCRSGLARMEKIVRE
RMNLFDFSSDTLTPGKIISAKGLVSVLKDFFSRSQLSQFMDQTNPVAELTHKRRLSALGP
GGLNRERAGFEVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRVVR
DGIVTDEIEYMTADVEEECVIAQASAELDEYNMFKTPVCWARYKGEAFEADTSTVTHMDV
SPKQLVSVVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAAIVGTGLEGRAAKDSGAI
IVAQEDGVVEYVDSYEIVVAKKNNPTLKDRYQLKKFLRSNSGTCINQTPLCSVGDVVTHG
DVLADGPATDKGELALGKNVLVAFMPWYGYNFEDAIIISERLIKQDAYTSIYIEEFELTA
RDTKLGKEEITRDIPNVSEEVLANLGEDGIVRIGAEVKPGDILVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKE
YKSQLAQLKVEHREKLGALLLNEKAPAAIVHRRSADILVQEGAIFDQETIELLERESLVD
LLIAPCDMYDVLKDILSSYETAVQRLEVNYKTEAEHIKEGDADLDHGVIRQVKVYVASKR
KLQVGDKMAGRHGNKGVVSKIVPEADMPFLANGETVQMILNPLGVPSRMNLGQVLETHLG
YAAKTAGIYVKTPVFEGFPESRIWDMMIEQGLPEDGKSYLFDGKTGERFDSKVVVGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVSGRTRIYESIVKGENLLRSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgttcaagtgcccggagcgggtcagcgtcaaaaagaaagaagatattttagatcttcct
aatcttgtcgaagttcaaatcaagtcgtataagcagtttcttcaaatcgggaagcttgct
gaagagcgagaaaacattggtttagaagaagtcttcagagaaattttccctatcaagtct
tataatgaagctacgattttagagtacctctcttataacttaggagtgcccaaatactcc
ccagaagagtgtattcgtcggggaatcacctatagtgttactttaaaggttcgtttccgt
ttaactgatgaaacggggattaaagaagaagaagtctatatgggaaccatccccatcatg
actgataagggaacttttattattaatggggcagagagagtcgttgtttctcaagtccac
cgttctccaggaatcaattttgaacaagaaaaacattctaaaggaaatgttttattttct
tttagaattattccttatcgaggaagttggttagaagctgtcttcgacattaatgacctt
atctatatccatattgataggaaaaaacgtcgcagaaagattttagctatgacgtttatc
cgagctttaggatattcaacagatgcagatattattgaagagttcttttctgtagaggag
cgttccttacgttcagagaaggattttgtcgcgttagttggtaaagttttagctgataac
gtagttgatgcggattcttcattagtttacgggaaagctggagagaagctaagtactgct
atgctaaaacgcatcttagatacgggagtccaatctttgaagattgctgttggcgcagat
gaaaatcacccaattattaagatgctcgcaaaagatcctacggattcttacgaagctgct
cttaaagatttttatcgcagattacgaccaggagagcctgcaactttagctaatgctcga
tccacaattatgcgtttattcttcgatgctaaacgttataatttaggccgcgttggacgt
tataaattaaataaaaaattaggcttcccattagacgacgaaacattatctcaagtgact
ttgagaaaagaagatgttatcggcgcgttgaaatatttgattcgtttgcgaatgggcgat
gagaagacatctatcgatgatattgaccatttggcaaaccgacgagttcgctctgttgga
gaactaattcagaatcactgtcgttctggattggctagaatggaaaagatcgttcgagaa
agaatgaatctctttgatttctcttctgataccctaactccaggaaagattatttctgct
aaagggttagtcagtgtcctgaaagatttcttcagccgttctcaattatctcagtttatg
gatcagacaaaccctgtcgcagaattgacgcacaagcgtcgtctgtcagcattaggacct
gggggattgaatagagaaagagctgggtttgaagttcgagacgttcacgcaagccactat
ggtagaatttgtccaattgagactcctgaaggaccaaacattgggttgattacttcacta
tcttcctttgctaagatcaatgaatttggattcatagagactccttatcgtgtcgtgcgc
gatggcatcgtgacagatgaaattgagtatatgacagcagatgttgaagaagagtgtgtc
attgctcaggcttctgcggagctcgatgagtataatatgtttaaaactcctgtatgctgg
gctagatacaaaggagaggcttttgaagccgacacaagtacggttacgcatatggacgtt
tctccaaaacagctggtatctgtggttacggggctgattcctttcttggaacacgacgat
gctaaccgagctcttatgggatcgaacatgcaacggcaggctgtaccattattgaaaacg
gaagctgctattgttggaactggattagaaggacgtgctgccaaagattctggagctatt
attgtggctcaggaagatggggtagtcgaatacgtagatagctatgagattgtcgtagcg
aagaagaataatccaacgcttaaggatcgttatcagcttaaaaaattcttaagatccaac
tccggaacatgcatcaaccaaactcctttgtgttctgtgggagatgtggttacgcatgga
gatgttttagcggatggcccagcaaccgataaaggggaattggctcttggtaaaaacgta
ttagtggccttcatgccttggtacgggtataacttcgaagatgcgattatcatctccgag
aggttgattaaacaagatgcgtacacttctatttacatagaagaatttgagttaacagct
cgagatacaaaactcggtaaagaagaaattactagagatattcctaacgtttctgaagag
gttttggcaaatctcggagaggatggtatcgtccgtattggagctgaagtcaagccggga
gatattcttgtcggtaaaatcactccgaaatctgagacggaactagctcctgaagagcgt
ttgttgcgagctatttttggagagaaggcggcggacgtaaaagatgcctctctaacggtt
cctcctggtacagaaggagtcgtaatggatgtcaaagtattcagcagaaaggatcgcttg
tccaagagcgatgatgaactggttgaagaagctgtgcatcttaaggatctacagaaagaa
tataagagtcagttggctcaattgaaagtagaacatagagagaaactaggggctctattg
ctcaatgaaaaagctcctgcagcgattgtacaccgtcgttcggcagatattttggttcaa
gaaggtgctatttttgatcaagagactatcgaactcttagaaagagagtcgctagttgat
ttgctgattgctccttgtgacatgtatgatgttttgaaagatattctttctagctatgaa
acagctgttcagcgtttggaagtcaattataaaaccgaagctgagcacataaaagaaggt
gatgctgacttagatcatggagttatccgacaagttaaagtttacgtggcttccaagcga
aaacttcaagttggggataaaatggctggacgtcacggaaacaagggagtggtttccaag
attgttccagaagcagacatgcctttcttagctaacggtgaaacagtacagatgattttg
aacccgttaggggtgccttctcgaatgaaccttggacaggttttagagacacatttagga
tatgctgcaaaaaccgcaggtatctatgtgaaaactccggtctttgaagggtttccagag
tcccgtatttgggatatgatgatagagcagggattgcctgaagatggtaagtcttatcta
tttgatggtaaaaccggagagcgtttcgatagcaaagtggtcgttggatacatctacatg
ttgaaattgagtcacctaattgctgataagatccacgctcgttctataggaccttactct
ctcgttacgcagcaacctcttggaggtaaagcgcagatgggaggacagagattcggggaa
atggaggtatgggccttagaagcgtatggggtagctcatatgttgcaagagatcctaact
gttaagtccgacgatgtttcgggaagaactcgtatctacgaatcgatcgttaaaggagaa
aacttacttcgttctggaacgcctgagtcgttcaatgttttgattaaagaaatgcaaggt
ctagggcttgatgttcgccctatggtagtagatgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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