KEGG   Yamadazyma tenuis: CANTEDRAFT_104063
Entry
CANTEDRAFT_104063 CDS       T03099                                 
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
cten  Yamadazyma tenuis
Pathway
cten03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CANTEDRAFT_104063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cten03021]
    CANTEDRAFT_104063
Enzymes [BR:cten01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CANTEDRAFT_104063
Transcription machinery [BR:cten03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     CANTEDRAFT_104063
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 A24_N_bact
Other DBs
NCBI-GeneID: 18245678
NCBI-ProteinID: XP_006685728
JGI: Cante1_104063
UniProt: G3B1A4
Position
Unknown
AA seq 1166 aa
MSTAKFRTLEREQRFQNPPKDKSAYPMLYEAIEPHIGSFNALTEGAHGGLLNLAVKDIGA
KTIFDSTSTDRLGNKLMIKVDSVEIGKPSIPTNDKLSLNSNTLPYECRERMISYRSKLRL
KVTWSVNDGEEMSEIRDCGLLPVMLRSSRCHLQNLSPDELVKHKEESDEFGGYFIVNGIE
KLIRMLIVQRRNHPMALIRPSFASRGNSYTKYGIQIRCVRPDQTSQTNVLHYLSDGNVTF
RFSWKKNEYLVPVQMILKALMETSDREIFDGIIGTDLSNSFLTDRLELLLRTYNKSYNLY
SNQETLAYLGDKFRVVFDGTPDMSDIEVGKLVLKRIVLVHLDSNQDKFRMLLFMIRKLYS
LVAGDCCPDNPDATQHQEVLLGGFLYGMIVKEKIEEYLNNFKLQVSSDLNRGLKVNFHER
KYISRVFQRINENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMV
HRGSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKITTKQSDVSGVPG
ALSQLGISSVNSFAAGPGVCCVQLDGKILGWTSHEKAKIVADTLRYWKIEGSHNIPLDLE
VGYVPPSNKGQYPGLYLFGGHARMVRPVKYLPLGKTDIVGPFEQVYMNIAVTPEEITNNI
HSHVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGVGLVHRSDNKLYRLQ
SGQTPIVKANLYDDYGMDNFPNGTNAVVAVISYTGYDMDDAMIINKSADERGFGYGTVYK
VEKVDLGMSRRRGDPITQHIGFGDDDWPEIWQNKLDADGLPQIGVKVEEGDPIIAYFDDT
LGKTKVKTYHSSEPAYIEEVKLLADDTNSECQQLSIKYRITRQPLIGDKFSSRHGQKGVC
SRKWPQTDMPFSETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGMAHDATPWKFS
ESDTPADYFGDQLLAAGYNYHGNEPMYSGVTGEELRADIYIGVVYYQRLRHMVNDKFQVR
STGPVNSLTMQPVKGRKRSGGIRVGEMERDALIGHGTAFLLQDRLLNCSDYTHTSLCKDC
GSLLTTQASVPRIGSMSSIRCRSCSKKLESFSNEFINESDIWEDGQGKKFVGGENTTTVA
IPFVLKYLDSELAAMGIKLKYNVQPR
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgtccaccgccaaattcagaacgttggagagggagcagcggtttcagaaccctcccaag
gataagtctgcatatcccatgttgtacgaagccattgagccccacattggctcgtttaat
gccttaactgaaggtgctcatggtggtctattgaacttggctgtcaaggacattggggcc
aaaaccatctttgattcaacttccaccgataggttagggaacaagttgatgatcaaggtc
gactctgtagaaatcggtaagccctcaatacccaccaacgataagttatcattgaattca
aacactttaccatatgagtgcagagagagaatgatcagctacagatccaagttgagatta
aaagtcacttggtccgttaacgatggcgaagagatgtctgaaatcagagactgtgggctc
ttgccagtgatgttgagatccagcagatgccaccttcagaacttatctcctgatgagttg
gtgaagcacaaggaagaaagtgatgagtttggaggttactttattgtaaacggtattgag
aagttgatcagaatgttgattgtgcaaagacggaaccaccccatggccttgatcagaccc
agttttgctagcagaggcaactcatataccaaatacggtattcaaatcagatgtgtcaga
ccagaccaaacttctcaaactaacgtattgcattaccttagtgatggtaacgtcaccttt
agatttagttggaagaagaacgagtacttggttcctgttcaaatgatattgaaggccctt
atggaaaccagtgatcgagagattttcgatggaatcattggcactgatctttccaactcc
ttcttgactgatagattggaattattattgagaacctacaacaagtcttacaacctttac
tccaatcaagaaactttggcatatttgggagacaaattcagagtggtgtttgatggaact
cctgatatgagcgatatagaagttggtaagttggtgttgaagagaattgtgttggtgcac
ttggactctaaccaagataagttcagaatgctattattcatgatcagaaaactatactcc
ttggttgctggagactgttgtccagataatcctgatgccactcagcatcaagaagtctta
ttgggtggatttttgtacggtatgattgtcaaagagaagatcgaagaatatttgaacaat
ttcaagttgcaagttctgtccgacttgaatagaggcttgaaagtcaacttccacgaacgt
aaatatatttcaagagtgttccaaaggatcaatgaaaatatcggtcaaaagttgcagtac
tttttgtctactggtaatttggtttcacagtctggtttagatttgcaacaagtaagtggt
tacacagttgtagcagaaaagattaatttccacagattcatttcccatttcaggatggtt
catagaggttctttcttcgctgagttgaaaacgaccaccgtcagaaaattgttacccgaa
tcctggggtttcttatgtccagtgcacactcctgatggttctccatgtggtttattgaat
cacttggctcacaagtgtaagattaccaccaaacagtcggatgtatctggagtccctggt
gcattgtcacaattgggaatatcttctgtgaactcgtttgctgccggtcctggtgtatgt
tgtgtgcaattggatggtaagattcttggatggacttcccatgaaaaagccaagattgtg
gctgacactttaagatattggaagattgaaggttctcacaacattcctttggacttggaa
gtcgggtacgtgcccccaagtaacaagggtcaataccctggattatatcttttcggaggc
catgccagaatggtgagacctgttaaatacttacccttgggcaagaccgatattgttggt
ccatttgaacaagtttacatgaatattgctgtaacacccgaagagattacgaataacatc
cacagccatgttgaattttctcccacaaacatcttgtcgattttggcaaacttgactcca
ttctcagatttcaaccaatctccaagaaatatgtatcaatgtcaaatgggtaaacaaact
atgggtactcctggtgttggtttagttcacagatctgataacaagttgtacagattacaa
tctggccagactccaattgtcaaggctaacttgtatgatgattatggaatggacaatttc
cctaacgggactaatgcagttgtggcagttatctcatacacgggttatgatatggatgat
gctatgattatcaacaagctggcagacgaaagagggtttggttatggtacagtctacaag
gtcgaaaaagtggacttgggaatgagtagaaggagaggtgatccaattactcaacacatt
ggttttggagacgacgactggcccgaaatctggcagaacaaattggatgccgatgggttg
ccacaaattggtgtcaaggttgaagaaggtgatccaattatcgcttactttgatgacaca
ttaggaaagaccaaggtgaaaacctaccattccagtgaaccggcctatattgaagaagtc
aagttgttggctgatgataccaacagtgagtgtcagcaactttcaatcaagtatagaatt
accagacaaccccttattggtgataagttttcttccagacatggtcaaaaaggtgtttgt
tcgagaaaatggccacaaactgacatgcctttcagtgaaaccggtattcagcctgacgtt
attattaaccctcatgctttcccatctcgtatgaccatcggtatgtttgttgaaagtttg
gcaggaaaggctggtgctttgcacggcatggcacacgatgctaccccttggaaatttagt
gaatctgatactccagcagattacttcggtgaccaattattggctgctggatataactac
cacggtaacgagcctatgtattcaggtgtcactggtgaagagttgagagctgatatctac
attggtgtggtttactaccaaagattgagacacatggtgaacgataagttccaggtcaga
tccactggtcctgtcaactctttgaccatgcaacctgttaaaggtaggaagagatctggt
ggtatcagagtgggagaaatggaaagggatgccctcattggacatggtactgcgttctta
ttgcaagatagattattgaactgctccgactacacccatacgtctttgtgtaaagactgt
ggttccttgttgaccactcaagcatctgtccctagaattggctccatgtcttccatcaga
tgtagaagttgttccaagaaattggagagcttttccaatgaattcatcaatgaatctgat
atctgggaagatggtcaaggaaagaagtttgtgggaggtgaaaatacgacgacggttgct
attccatttgtattgaaatatttggattcggaattggcagctatgggcatcaagttgaag
tacaacgttcaacccagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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