KEGG   Clostridium thermosuccinogenes: CDO33_05560
Entry
CDO33_05560       CDS       T05300                                 
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
cthd  Clostridium thermosuccinogenes
Pathway
cthd00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cthd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CDO33_05560
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cthd01007]
    CDO33_05560
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cthd03016]
    CDO33_05560
Enzymes [BR:cthd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     CDO33_05560
Amino acid related enzymes [BR:cthd01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   CDO33_05560
Transfer RNA biogenesis [BR:cthd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CDO33_05560
 Prokaryotic type
    CDO33_05560
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N FapA TMF_TATA_bd DUF4201 Prefoldin_2 tRNA-synt_2 ChrB_N
Other DBs
NCBI-ProteinID: AUS95951
UniProt: A0A2K2FQG9
Position
1294035..1295312
AA seq 425 aa
MLDIKFVRENPEIVKQNIRNKFQDSKLGLVDEVIKLDAELRDTKKEAEALRANRNAISKK
IGGLMAQGKREEAEELKKEVTANSQRLAELEAKENELEKKVKDIMMVIPNIIDPSVPIGR
DDSENVEIQRFGEPVVPDFEIPYHTDIMAKFNGIDLESARRVSGNGFYYLMGDIARLHSA
VISYARDFMINRGFTYCIPPYMIRSEVVTGVMSFAEMDAMMYKVEGEDLYLIGTSEHSMI
GKFIDTILPESALPQTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVICKPEDSMM
WFDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNLG
DAQARRLKIRVDGEKGRYFAHTLNNTVVAPPRMLIAFLENNLNADGTVSIPPALQPYMGG
MTVIK
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgctggacattaaatttgtaagggagaaccccgaaatcgtaaagcaaaatattaggaac
aagttccaggacagcaagctgggcttggtggatgaagtgatcaagctggatgctgagctc
agggatacgaagaaggaagctgaagctttaagggcaaacagaaatgcgatttccaaaaaa
atcggaggattgatggcccaaggtaaaagggaagaggcagaagagctgaaaaaggaagtt
acagcaaattcccagcgtttagctgagctggaggcaaaggaaaatgaactggaaaagaaa
gtaaaggatatcatgatggtaatacccaacattatcgaccccagcgttcccatcggcagg
gacgatagtgagaatgttgaaattcagcgctttggtgagccggtggtacctgattttgaa
atcccgtaccacaccgatatcatggccaagtttaacggcattgatctggaaagtgccaga
agggtttcaggaaatggcttctactatctgatgggggatatagccaggcttcattccgct
gtcatttcctacgccagggactttatgataaatcgcggctttacatattgcatcccgccc
tatatgatccgcagcgaagttgtgaccggtgttatgagttttgcggaaatggatgcgatg
atgtataaggttgaaggcgaggacttgtatttgataggaaccagcgagcattccatgata
ggcaaatttattgacacaatacttccggagtcagcgctgccccagacattaaccagctat
tccccatgcttcagaaaggaaaagggagcccacggcttggaagagaggggagtatatcgc
atccaccagtttgaaaagcaggaaatgatagtaatatgcaaaccggaagacagcatgatg
tggtttgacaagctgtggcagaacacagtggatttcttccgttccctggatataccggtt
aggactttggagtgctgttccggcgatttggctgatttgaaagtgaagtcggtggatgtg
gaggcatggtcgccgaggcagaaaaagtatttcgaagtaggaagctgttccaatttggga
gatgctcaggcacgacgccttaaaatccgtgtggatggagaaaaaggaaggtatttcgcc
catacattaaacaatactgtcgtagcacctccaagaatgctgattgccttcctggagaac
aatctcaatgccgatggcaccgtcagcattcctcctgctctgcagccatacatgggcgga
atgacggttattaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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