KEGG   Comamonas thiooxydans: CtCNB1_3628
Entry
CtCNB1_3628       CDS       T01109                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
ctt  Comamonas thiooxydans
Pathway
ctt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ctt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CtCNB1_3628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctt03019]
    CtCNB1_3628
Enzymes [BR:ctt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     CtCNB1_3628
Messenger RNA biogenesis [BR:ctt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CtCNB1_3628
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd DUF4049
Other DBs
NCBI-ProteinID: ACY34374
Position
complement(4083203..4084768)
AA seq 521 aa
MIKTIIDKLLGKAPAAPRSRKPKFGKREEVPVQVHGIDPNLVDRRAIDVVQTLKRSGYEA
YIVGGAVRDLLLGLRPKDFDVATDATPEQVKNLFRRAFIIGKRFRIVHVVYGRGRENEVI
EVSTFRAFLDNSAAEQVSGNERTSKNQLAGLKHAVDASGRVLRDNVWGPQDQDATRRDFT
INAMYYDPETQIVVDYHGGIADAKKKVLRMIGDPATRYREDPVRIIRAVRFAAKLSGKGF
KLEAKTAKPLVECEPLLQEVPQSRLFDEMLKLLQTGHALASVAQLKELGLSRGIYPLLDV
VMERADHPFVQAALMDTDRRVAEGKPVAPSFLLACVLWQDVKQGWEKRLAKSYHPFPALQ
ESIDEVFDQRIGDVSGRGKLAADMREIWVMQPRFDKRTGATPHSMVAQPRFRAGFDFMRL
RADIGEVEESLASWWQEFQQADDAQRDDLIAQARDEQRARQRAQQQTAPKVHRVTKKKAE
GEQESPLDQVASEGDAAAPKKRRRRRRKPSAGAAPVAGGNE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgatcaagaccattattgacaagctgctgggcaaggcgcccgcagccccccgctcgcgc
aagcccaagttcggcaagcgtgaggaagtgccggttcaggtgcatggcatagacccgaat
ctggtggaccgtcgcgccatcgatgtggtgcagaccctcaagcgctcgggctacgaagcc
tatatcgtcggcggcgccgtgcgcgacctgctgctgggcctgcgtcccaaggacttcgac
gtggccaccgatgccacgcccgagcaggtcaagaacctgtttcgccgcgccttcatcatc
ggcaagcgttttcgcatcgtgcacgtggtctatggccgcggccgcgaaaacgaagtcatc
gaggtttccaccttccgtgcctttctggacaacagcgcggccgagcaggtcagcggcaat
gaacgtaccagcaagaatcagctcgcaggactgaagcatgccgtggatgccagcggccgc
gtgctgcgtgacaacgtctggggcccgcaggaccaggatgccacgcgccgcgacttcacc
atcaacgccatgtactacgaccccgagacacagatcgtggtcgactatcacggcggcatt
gcggatgccaagaagaaggtgctgcgcatgatcggcgatccggccacgcgctaccgcgaa
gacccggtgcgcatcattcgggccgtgcgctttgccgccaagctcagcggcaagggcttc
aagctcgaagccaagactgccaagcccctggtcgagtgcgagccgctgctgcaggaagtg
ccgcaaagccgcttgttcgacgaaatgctcaagctgctgcagaccggtcacgcgctggcc
tcggtggctcagctcaaggaactgggcctgtcgcgcggcatctatccgctgctggacgtg
gtcatggagcgtgccgaccatcccttcgtgcaggccgcactgatggataccgaccgccgt
gtggccgaaggcaagcccgtggcgcccagctttttgctggcctgcgtgctgtggcaggac
gtcaagcagggctgggaaaagcgtctggccaagagctatcaccctttccctgcgctgcag
gagtctatcgacgaggtgttcgatcagcgcatcggcgatgtctcgggccggggcaagctg
gctgccgatatgcgcgagatctgggtcatgcagccgcgctttgacaagcgcaccggagcc
accccgcactccatggtggcgcagccgcgcttccgtgccggctttgacttcatgcgcctg
cgtgccgatatcggcgaggtcgaggaaagcctggccagctggtggcaggagttccagcag
gccgatgatgcccagcgcgatgatctgattgcccaggcccgcgacgaacagcgcgcccgc
cagcgtgcccagcagcagacggcgcccaaggtgcatcgcgtgaccaagaaaaaggccgaa
ggcgagcaggaaagcccgctggatcaggtggcctcagaaggcgatgccgccgcgcccaaa
aagcgccgtcgccgtcgccgcaaaccatccgccggtgctgctccggtcgccggtggtaat
gaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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