KEGG   Cuculus canorus (common cuckoo): 104057954
Entry
104057954         CDS       T08597                                 
Symbol
CCNT1
Name
(RefSeq) cyclin-T1
  KO
K15188  cyclin T
Organism
cuca  Cuculus canorus (common cuckoo)
Pathway
cuca03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104057954 (CCNT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cuca03021]
    104057954 (CCNT1)
Transcription machinery [BR:cuca03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     104057954 (CCNT1)
    Brd4/P-TEFb complex
     104057954 (CCNT1)
    7SK RNP complex
     104057954 (CCNT1)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N UPF0253
Other DBs
NCBI-GeneID: 104057954
NCBI-ProteinID: XP_009557688
Position
Unknown
AA seq 689 aa
MDTREGGGTPFPVGGGPPSRDGPVLFLNRPTSSQLTINTAIVYMHRFYMVQSFTQFHRNS
VVPAALFLAAKVEEQPRKLDYVIKVAHACLHPQEPPLDTKSEAYLQQAQDLVILESIILQ
TLGFEITIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIH
LACKWSNWEIPVSTDGKHWWEYVDGTVTLELLDELTHEFLQILEKTPNRLKRIRNWRASQ
AAKKSKADDHGEDESLSEQTILNMISRNNSSDMNIAGLMSMSTSSTAGAGPSLTATADSP
SEQSSADVSQTDHWHPPAKLDISQSHRTNESSSAAEHPSQQDGAGYQKHPSKNAPSAKVS
LKEYRAKHAEELAAQKRQLENMEANVRSQYAYAAQNLLVQQQREGPENPERPPGPEKGDK
ASALKLRLPVASGGDNRPLPSKQEEIKMRIKMPTGADRHGSSDESSAKNREHKEKHKGHS
SNHHHHHHNHHSHKHLHAPLGVGPSAVPGKRPGDSKHGGPPGSLPHKSYGPLGSSSRKRP
LPEEAAAAAHDHQPKVSKASKGPGVPFPYPHLPGGVHLPGHGSDTSNLPLSQANKARGTH
SKSDKGPTGANGHNASQASDYQDTVNMLHSLLHAQGMQPTQPSTFDFHAYGELLNPRAST
SSRAATNTDKPRPPPLPSEPPPPLPPLLK
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggacacaagggagggtgggggcacccccttcccggttgggggtggccccccctcaagg
gatggccccgtgcttttccttaaccgccccaccagctcccaacttaccatcaacacggcc
atcgtgtacatgcatcgcttctacatggtgcagtccttcacccagttccacaggaactca
gtggtaccggcagctctgttcctggctgccaaggtggaggagcagcctcgaaagctggat
tatgtcatcaaggtagcccatgcctgtctccatccccaggaacctcctctagacaccaag
agcgaggcttacctgcaacaagcccaagacctggtcattctagagagcataatactgcag
accctgggttttgagatcaccatcgatcacccccacacccacgtggtgaagtgcacgcag
ctggtgcgagccagcaaggacttggcgcaaacttcctatttcatggctaccaacagcctg
cacctgaccaccttcagcctgcagtacacccctcccgttgtggcctgcgtctgtatccac
ctggcttgtaagtggtccaactgggagatcccagtctccacggacgggaagcactggtgg
gaatacgttgatggcactgtaactctggagctcttagatgaactgactcatgaattcctg
caaattcttgagaaaactcccaaccggcttaaacgcatccggaactggcgggcttctcaa
gcagccaagaagtccaaggctgatgaccacggtgaagacgagagcctctcggagcagacg
atcctcaacatgatttccaggaacaacagctcggacatgaacatcgctggattaatgagc
atgtcgacatcctcgactgccggagcggggccttctctgacggccacagcggactctccc
agcgagcagagcagtgcggatgtatcccagactgaccactggcatcctccagccaagctg
gacatcagccagagtcacaggactaacgaaagctcttcggctgctgagcatccgtcgcag
caagatggcgctggctatcagaaacaccccagcaagaacgctccgtcagccaaagtctcg
ctcaaggaataccgggccaagcacgccgaggagctggcggcgcagaagcggcagctggag
aacatggaggccaacgtgcgctctcagtacgcctacgccgcgcagaaccttctggtccag
cagcagcgggaaggccctgagaaccccgaacgtcctcctgggcccgaaaagggtgacaaa
gcctcggctttgaagctgaggctcccggtggcaagtggaggagataacaggccgctcccc
tccaagcaggaggagataaaaatgcggatcaagatgccaaccggtgcggacaggcatggc
tcctcagatgagagcagcgccaagaaccgggagcacaaggagaaacacaagggccactct
tccaaccaccaccaccaccaccataaccatcattctcacaaacacttgcatgccccgctc
ggcgtcggccccagtgccgtgcccggcaagcggccgggagactctaaacatggtggccca
cccggctccctgccccacaagagctacgggccccttggctcctcatcccgcaagaggccc
ctgcctgaggaggcggcagccgcggcccacgaccaccaacctaaagtcagcaaagcctcc
aaaggccccggtgtgccgtttccatacccgcacctccccggaggggtccatctcccgggg
catggctcagatacgagcaatcttcctttatcccaagctaacaaagctcggggtacccac
agcaaatcggacaaggggcccacaggggccaacgggcacaacgccagccaggccagtgac
taccaagatacggtcaatatgctgcactcgttgttgcacgcgcagggcatgcaacccacc
cagccctccactttcgacttccacgcttacggcgagctcttgaatccccgcgcttccacc
agctccagagccgccaccaacacggacaaaccccggcccccgcccctgccctcagaaccc
ccccctccgctcccccctctcctcaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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