KEGG T04978: BKK80

Cupriavidus malaysiensis: BKK80_00535

Entry

BKK80_00535       CDS       T04978

Name

(GenBank) ATP-dependent DNA helicase Rep

K03656

ATP-dependent DNA helicase Rep [EC:5.6.2.4]

Organism

cup Cupriavidus malaysiensis

Brite

KEGG Orthology (KO) [BR:cup00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cup03400]
    BKK80_00535
Enzymes [BR:cup01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BKK80_00535
DNA repair and recombination proteins [BR:cup03400]
Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BKK80_00535

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII DEAD AAA_11

Other DBs

NCBI-ProteinID:

AOZ04489

Position

1:complement(107251..109344)

AA seq 697 aa
MTHGLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFEPRHIAAVTFTNK
AAKEMQERIGKLMEGKTTREGKRLPLKQLTVCTFHSLGVQILRAEAEHVGLKPQFSIMDS
DDCFGLVQEQLGTTDKKLIRSVQGTISLWKNGMVDPEAAIAQAADADQHQAALVYRNYVA
TLHAYQAVDFDDLIRLPAELFARDETVRLKWQNRLRYFLVDEYQDTNACQYQLLKLLAGG
SHLRAPAFTAVGDDDQAIYGWRGATLDNLRLLQTDFPDLKVIKLEQNYRSTVRILEAANA
VIANNPKLFDKKLWSEHGMGDPVAINPMNDEEHEAESVVFRLSAHKFERRAQFRDYAILY
RGNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFIRAITTP
RRGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCESMVRLAARAAK
DPATQVLDDLMEGIHYEAYLYDTFDERQAQSRWTTTLEFLDWLKRKGTKPEGGDGTGEAT
GYDTADGFGDEGKNLLELTQTVALMSMLEGREEDPDAVRLSTLHASKGLEYPHVFLVGVE
EGILPHCREDEDMSDEKVEEERRLMYVGITRAQRSLHISWCKKRKRARDTYSCQPSRFIG
EMKLEEAPAPKDTAPAMSPKDRLAGLKALLGNGKAGV

NT seq 2094 nt +upstreamnt +downstreamnt
atgacccacggactcaatcccgcccaatccgaagctgtccgctatctcgatggtccctgc
ctggtactggccggcgccggctcgggcaagaccagggtgatcacgcagaagatcgcccac
ctgatcgaggacaagggcttcgagccccgccacatcgccgccgtcaccttcaccaacaag
gcggcgaaggagatgcaggagcgcatcggcaagctgatggaaggcaagaccacgcgcgaa
ggcaagcgtctgccgctcaagcagctgacggtctgtaccttccactcgctcggcgtgcag
atcctgcgcgccgaggccgagcacgtgggcctgaagccgcagttctcgatcatggactcg
gacgattgcttcgggctggtgcaggaacagctcggcaccaccgacaagaagctgatccgc
agcgtgcagggcacgatctcgctgtggaagaacggcatggtcgatcccgaagcggccatc
gcgcaggccgccgatgccgaccagcaccaggccgcgctggtctaccgcaactacgtggcc
acgctgcatgcctaccaggcggtggatttcgacgacctgatccgcctgccggccgaactg
ttcgcgcgcgacgagacggtgcgcctgaagtggcagaaccgcctgcgctacttcctggtc
gacgagtaccaggacaccaatgcctgccagtaccagctgctcaagctgctggcgggtggc
tcgcacctgcgcgcgccggccttcaccgcggtcggcgacgatgaccaggccatctacggc
tggcgcggcgccacgctcgacaacctgcgcctgctgcagaccgatttccccgacctgaaa
gtgatcaagctggagcagaactaccgctccacggtgcgcatcctcgaagcggccaacgcc
gtcatcgccaacaatccgaagctgttcgacaagaagttgtggagcgagcacggcatgggc
gacccggtcgccatcaacccgatgaacgacgaggagcatgaggcggagtccgtggtgttc
cgcctgtcggcccacaagttcgagcgccgcgcgcagttccgcgactatgccatcctgtac
cgcggcaatcaccaggcacgcctgttcgagcagatcctgcgccgcgaacgcattccctat
gtactgtcgggcgggcagagcttcttcgacaaggcggaaatcaaggacatctgcgcctac
ctgcgcctgatcgccaatccggacgacgaccctgctttcatccgcgccatcaccacgccg
cggcgcggcgtcggcaataccacattggaggtgctgggcaccttcgccggccaggccaag
gtctcgctgttcgaggcggccatgatgggcggcatcgaaggcaagctgcagccgcgccag
ctggagccgctgcgcgtgttctgcgagtcgatggtgcggctggccgcgcgcgccgccaaa
gacccggccacgcaggtgctcgacgacctgatggaaggcatccactacgaggcctacctc
tacgacaccttcgacgagcgccaggcacagtccaggtggaccaccacgctggaattcctc
gattggctcaagcgcaagggcaccaagcccgagggtggcgacggcacgggcgaggccact
ggctacgacaccgccgacggcttcggcgacgagggcaagaacctgctcgagctgacacag
acggtggcgctgatgagcatgctcgagggccgcgaagaagatcccgacgcggtgcggctg
tcgacgttgcatgcctccaagggcctggagtacccgcatgtgttcctggtcggcgtggag
gagggcatcctgccccattgccgcgaggacgaggacatgagcgacgagaaggtcgaggaa
gagcgccgcctgatgtacgtcggcatcacgcgtgcccagcgcagcctgcacatcagctgg
tgcaagaagcgcaagcgcgcgcgcgacacctattcctgccagccgtcgcgcttcatcggt
gaaatgaagctggaagaggcgccggcgcccaaggacacggccccggccatgagccccaag
gaccgcctggccggactcaaggcgctgctcggtaacggaaaggccggggtctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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