KEGG   Corynebacterium ulcerans 210931: Cul210931_0600
Entry
Cul210931_0600    CDS       T03414                                 
Symbol
uvrD3
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cuq  Corynebacterium ulcerans 210931
Pathway
cuq03420  Nucleotide excision repair
cuq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cuq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cul210931_0600 (uvrD3)
   03430 Mismatch repair
    Cul210931_0600 (uvrD3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cuq03400]
    Cul210931_0600 (uvrD3)
Enzymes [BR:cuq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Cul210931_0600 (uvrD3)
DNA repair and recombination proteins [BR:cuq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul210931_0600 (uvrD3)
   MMR (mismatch excision repair)
    Other MMR factors
     Cul210931_0600 (uvrD3)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 AAA_12 ADDB_N DUF5678 AAA_11 Rng_hyd_C DZR
Other DBs
NCBI-ProteinID: AIU29961
Position
637359..639410
AA seq 683 aa
MIDLNDLDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVAHVKDRKIPAAADKIAEVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLTLEGMRPPGPEPEFCTFDDEPAEARAVASRIKELLNKGVAASEIAVLYRINA
QSAAFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRAGTESIRGSALETLVRS
ALAPLGLTPEEPEGTQARERWQSLEALAELTVELTRATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHAIKGGDSHIEEERRLFYVGVTRARE
HLVCSWAKARQEGGRATRKRSRFFDGIVEEPIDIAVPPRSKRSKRCRVCGASLGSPSEIV
MRRCVDCPSGVDEEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEASPTTTDDLLQI
SGIGQMKVEKYGSSLLETLAQFR
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgattgatctcaatgatctggatagcgatcaaagggctgccgctagtgctcctcgcggg
ccggtagccatccttgcgggtgccggaacgggtaagactcgaacgattacctatcggatt
gccaaccttattgatcgtggcatggctagtcctaatcgcgtactggcggtgacgtttaca
cgtcgtgctgcgggggaaatgcggcaccggctgggcgtcatgggcgtaggaggcgtacag
gcgcagacgttccactcagctgcgatgcgccagttgtcgtatttttggccgcaagtggcc
gggaatctgccgtggaaattgttggataacaagtttccgcttgtgggcaaggctgcgcgc
tcggtgggcatagaaacgacgacggaaaacgtgagagatcttctaggcgagatcgagtgg
gcaaaggctacgttgataacgcccgaccgttatgtggcgcacgtgaaggaccgtaagatt
cccgcagccgcagataaaatcgccgaggtataccgcagatatgagcaggctaaaacaaca
agtgagggcatgcttctagacttcgatgatctgttattgcacacggcgggagccattgag
aattcgactgcgattgcagaggaatttcgggagcagtaccgcacgtttgtcgttgacgaa
taccaggacgttacgccgttgcagcaacgagtgcttgacgcatggctgggggagcgcgat
gacatcactgtggtgggagacgctaaccagaccatttactcgtttacgggagcgactcct
aattatcttttggggttttcgcgtaagtatcctcacgcaacggtggtcaagttacagcga
gattataggtcgactcctcaagtaacagaccttgccaatacggtgatcgggaaagcacgg
ggccgggtggcgggcactcgattgacgttggaaggaatgcgcccgcctggcccagaacca
gaattttgcactttcgacgatgaacctgctgaggcacgcgccgtagcgagcagaattaaa
gaactcctgaacaagggagtagcagcgtcggaaatcgcggtgctttatcgaattaacgcg
cagtcggcggcttttgaacaggccctcgcggatgccgggattgtctaccaggtgcgcggt
ggcggtgagttcttccagcgcgcggagattcgtcaagccatgtctcagctggtgcgcgtc
gcacagcgtgcaggaacagagtcaattcgtggttccgccctggagaccttggtgcgctcg
gcgttagcgcctctgggattaaccccggaagaaccggaaggcacgcaggcgcgtgaacga
tggcagtctctagaggccctcgctgagctcacagtagagttgactcgagctacaccggat
ctggatatccaggggcttctagaacaactcaatcagcgggcaagcgccaaacaccctccg
acgatgcaaggagtgacattagcgtctttacatgcagctaaaggcctggagtgggatgcg
gtgtttcttgtagggcttgtcgacggcaccctcccgatcacccacgctattaagggggga
gactcgcacattgaagaggagcgtcggcttttctacgtcggtgttactcgtgccagggag
caccttgtgtgctcgtgggcaaaagctcgtcaggagggcggacgcgcgacacggaagaga
agccggttctttgacggcattgtggaagagcctatcgatatcgccgtcccaccacgcagt
aagcgttcaaagcgctgtcgtgtgtgcggcgcatccctgggctccccctcagaaatcgtg
atgagaagatgcgtcgattgcccgtcgggcgttgacgaggaggtgtttgagactctgaag
gcgtggcgtctagacatggctaaagaaggcggtgttcctgcttacatagtcttcacagac
gcaaccctgcacgctattgctgaggccagcccaacgaccacagatgacctactacagatt
tccggtatcggtcagatgaaagtagaaaagtacggcagtagcttgctggaaactttggct
caattccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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