KEGG   Cyprinodon variegatus (sheepshead minnow): 107085434
Entry
107085434         CDS       T06110                                 
Symbol
lrrc56
Name
(RefSeq) leucine-rich repeat-containing protein 56 isoform X1
  KO
K25425  leucine-rich repeat-containing protein 56
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cvg03037]
    107085434 (lrrc56)
   04812 Cytoskeleton proteins [BR:cvg04812]
    107085434 (lrrc56)
Cilium and associated proteins [BR:cvg03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   107085434 (lrrc56)
Cytoskeleton proteins [BR:cvg04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     Dynein-related proteins
      107085434 (lrrc56)
SSDB
Motif
Pfam: LRR_4 LRR_9 LRR_8
Other DBs
NCBI-GeneID: 107085434
NCBI-ProteinID: XP_015231227
Position
Unknown
AA seq 608 aa
MSVSHESVGQGVRPGPARVRVTEPSGSESINPTPTPKPNIDPSNALEAYLSPERLEQLCG
TSDLSCVKYLELCLNTQENTLGDIGVYLPRLEMLKMNNSLITSLRDLGTTLSHLQVLWMN
RCCLQDLSGIFTFSSLKELYLAFNHVSDLSQVAMMENLQLLDLEGNRVDDLIQIHYLGLC
PNLHSLSLEGNPVCVRPNPTSLQVEEYNYRAAVRELVPQLRYLDDVKLEEDRVTCCSTTG
EHWEILRISMQDSKFFESPGAKPVSSASTRTMSATRHTVLSPFGSRPGSSDSDLPSVEAD
TSTLTHGTGNILFCGNPVRAVRARRQKLKTAPTRSSLTPCGPPIHVPEHTYDLEEPSSED
RVNVFAELRAWKEQYSKRLDIIEKERSPQILTIHHSGKEETDIEGEEEEEEGFGCMKSRF
SDEEQEEDEVCASLDTGSPDSSFQSLSPDIHQQETFFPNIARQSLCPDIPFSPSPPLHAA
PAPANMRLPGIRARRFCLSQSKPQHFDPKSLAPLTASAAVEMDLLSERRQHLAGTSYLPV
PPRSSPLKGPVKSCADTDMSGLRLTHKQKKTKDPEGPKMSRPHTAEAALQKHYLHHLLQP
YRGSSHLD
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgagcgtgagccatgaatctgtgggccagggtgtccggcctggtccagcgcgggttcgg
gtgactgagcctagcggttcagagagcatcaatcctactccaacccccaaaccaaacata
gacccaagcaatgcactggaagcttacctttcaccagaaagattggaacagttgtgcgga
actagtgacctctcttgtgtgaaatatctggaactctgcctaaacacccaagaaaatacg
ctgggggacattggtgtttacttgcccagattagagatgctgaaaatgaacaacagtttg
atcacatcactgagagacctgggaaccaccctgtcccacctgcaggtgctatggatgaac
cgctgctgccttcaggacttaagtggcattttcactttttcttctcttaaggagctctat
cttgcctttaaccatgtgtccgacctaagccaggttgccatgatggagaacctgcagctg
ttagatttggaagggaaccgtgtggacgacctcatccagattcattatctgggtttgtgt
cccaatctccattctctctcgctggaggggaaccctgtgtgtgtacgccctaaccctact
tcccttcaggttgaagagtataattacagagcagcagtgagggagttggtccctcagttg
cgttaccttgatgatgtgaagttggaggaggacagggtgacctgctgtagcaccacaggg
gaacactgggaaattctcagaatttctatgcaagattccaagttctttgaatctcctggt
gctaaacctgtttcatctgcaagcaccagaaccatgtcggcgaccagacacacagttctt
tccccttttggatcaagaccaggctcttcagactctgacctaccatcagtggaagcagat
accagcacccttacccatggaacaggcaacattctgttttgtggaaatcctgtgcgggct
gttcgtgcaaggagacaaaagcttaagacggcaccaaccaggtcatctctgaccccttgt
ggcccccccatccatgtcccagaacacacgtatgacctagaggagcccagttctgaagac
cgtgttaatgtgtttgcagagctgagggcctggaaggaacagtacagcaaacgtctagac
attatagagaaagagcgatcaccacagatccttactattcaccattctggtaaagaagag
acagatatagagggagaggaagaagaggaggaaggatttggttgtatgaagagcaggttt
agtgatgaagaacaagaggaagatgaagtttgtgctagtttagatactggctcaccggac
tcttcatttcagtctctttccccagacatacatcaacaagaaacctttttccccaatata
gctcgacagtccctgtgtccagacatccctttttctccgtctccacctcttcatgccgct
ccagctcctgctaacatgaggttgccagggattcgtgcacgcagattttgtctttctcag
tccaagccacaacattttgatccaaaaagtttggccccactaacagcgtcagctgcagta
gaaatggacctcctatctgagagacggcagcacttggcagggacctcatacttacccgtt
ccaccaagaagttccccgcttaaaggaccagtgaagtcctgtgcggatacggacatgagt
ggtctacgtttgacccacaagcaaaagaagaccaaggacccagagggccccaaaatgtcc
cgccctcacactgctgaagcagccctgcaaaaacattacttgcaccatctgctccaaccc
tacagagggagctcacacctagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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