KEGG T06110: 107102734

Cyprinodon variegatus (sheepshead minnow): 107102734

Entry

107102734         CDS       T06110

Symbol

sidt2

Name

(RefSeq) SID1 transmembrane family member 2

K26112

SID1 transmembrane family member 2

Organism

cvg Cyprinodon variegatus (sheepshead minnow)

Brite

KEGG Orthology (KO) [BR:cvg00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107102734 (sidt2)
Membrane trafficking [BR:cvg04131]
Autophagy
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    107102734 (sidt2)

SSDB

Motif

Pfam:

SID-1_RNA_chan

Other DBs

NCBI-GeneID:

107102734

NCBI-ProteinID:

XP_015257640

Position

Unknown

AA seq 633 aa
MSVQDIQCPVYDLDNNVAFIGMYQTMTKKGAITVQKKDFPSNSFYVVVVVKTEDEACGGP
LRFYPLRPDELIDAGNRTKDLDVVVSPAIDSEKYWMGVLFCSGIFLSFYVLTLLVTCVEN
KRMKMKEKFETKPDMSPAETASLLWKNGDGKIPASPYEYGSFADNGSTLSSEAITDSATS
TDNNYGYLERSLDSIARSRQESLSSVEEDDYDTLDDIDSDKNIVRTKKYLCVADLARKDK
RVLSKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGALSA
FNNILSNLGYVLLGLLFLFIVLKRDVAHKRALDRNNLNALECGIPKHFGVYYAMGTALMM
EGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYTAYACLAAVIFF
SVLGVVFGKGNMVFWIVFSVIHILATLFLSTQLYYMGRWRLDSGVLRRIVYVLYTDCIRQ
CSGPMYIDRMVLLVMGNIVNWSLAAYGLIERPNDFASYLLAIAICNLLLYFAFYIIMKLR
SGERIKCLPLVCILFTAVVWGFALYFFFQGLSTWQKTPAESREHNRDCILLSFFDDHDIW
HFLSSIAMFGSFLVLLTMDDDLDTVQRDKIYVF

NT seq 1902 nt +upstreamnt +downstreamnt
atgtctgttcaggacatccagtgccccgtctatgaccttgacaacaacgtggcctttatt
gggatgtaccagactatgaccaagaagggtgccatcactgtgcagaagaaggatttccct
agcaacagtttctacgtggtggtggtggtaaaaactgaggacgaggcttgtggcggcccg
ctgcgcttctaccctctgcgccccgatgagctgattgacgctggaaaccgcaccaaggac
ctcgacgtggtcgtctcacctgcaattgattctgagaagtactggatgggggtgttgttt
tgtagcgggatcttcctctcgttctatgtgttgacgctgctggtcacctgcgtggaaaac
aagcgaatgaaaatgaaagagaagtttgagaccaaaccagacatgtcgcctgctgagacg
gcctcccttctttggaagaacggcgatggaaagattccagcctctccgtacgagtatggc
tcctttgcggacaacggcagcacgctgagctccgaggccatcactgacagcgccacatca
accgacaacaactacggatacctggagcgatcactggacagcattgcacggagcaggcag
gagtcgttaagctctgtggaggaggatgactacgacacgctggacgacatcgactccgac
aaaaacatcgtccgcacaaagaagtacctgtgtgtggctgacctggctcgcaaagacaag
agggttctcagcaagaagtaccaaatctacttctggaacatcgccaccatagctgtgttc
tacgcgctccccgtcatccagctggtcatcacctatcagacggtcgtcaacgtgacagga
aatcaagacatctgctactataacttcctgtgcgcccaccccctgggtgctctgagtgcg
ttcaacaacatcctcagtaaccttggctacgtgttgctggggctcctgttcctcttcatc
gtcctaaagagagacgtcgcacacaaacgggcgctggatcgcaacaacctcaacgcgctg
gagtgtggcattccgaagcatttcggggtttactacgccatgggaaccgcgctgatgatg
gagggcttgctcagtgcgtgctaccatgtctgtccaaactacaccaacttccagtttgac
acctccttcatgtacatgatcgcagggctgtgcatgttgaagctgtatcagaagagacac
cccgacatcaacgccagtgcctacaccgcctacgcctgcctggcggcggtcatctttttc
tccgtgctgggggtggtttttgggaaaggaaacatggtgttctggatcgttttctctgtc
atccacatcctggccaccctgttcctcagcacacagctctactacatgggccgatggcgg
ctcgactctggtgtcctgcgccgcatcgtttatgtgctctacactgactgcatcagacag
tgcagtggacccatgtacatcgaccgtatggtgctgcttgtaatgggtaatatagtcaac
tggtctctcgccgcctacgggctcatagagagacccaacgacttcgcctcctacctgctg
gccatcgccatctgcaacctgctgctttactttgccttctacatcatcatgaagctgcgg
agcggcgagagaatcaaatgtctgccgttggtgtgtattctcttcacggcggtggtgtgg
gggttcgcgctctacttcttcttccagggactcagcacctggcagaaaactccagctgag
tctcgagagcataaccgagactgcatcctgttgtctttctttgacgaccacgacatctgg
cacttcctgtcctccatcgccatgttcgggtccttcctggtcctgctgaccatggacgac
gacctcgacaccgttcagagagacaagatctacgtcttctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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