KEGG   Chromobacterium violaceum: CV_4014
Entry
CV_4014           CDS       T00147                                 
Symbol
groEL1
Name
(GenBank) chaperonin 60kD subunit
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
cvi  Chromobacterium violaceum
Pathway
cvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CV_4014 (groEL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvi03019]
    CV_4014 (groEL1)
   03110 Chaperones and folding catalysts [BR:cvi03110]
    CV_4014 (groEL1)
   03029 Mitochondrial biogenesis [BR:cvi03029]
    CV_4014 (groEL1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvi04147]
    CV_4014 (groEL1)
Enzymes [BR:cvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CV_4014 (groEL1)
Messenger RNA biogenesis [BR:cvi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CV_4014 (groEL1)
Chaperones and folding catalysts [BR:cvi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CV_4014 (groEL1)
Mitochondrial biogenesis [BR:cvi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CV_4014 (groEL1)
Exosome [BR:cvi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CV_4014 (groEL1)
  Exosomal proteins of other body fluids (saliva and urine)
   CV_4014 (groEL1)
  Exosomal proteins of breast cancer cells
   CV_4014 (groEL1)
  Exosomal proteins of colorectal cancer cells
   CV_4014 (groEL1)
  Exosomal proteins of bladder cancer cells
   CV_4014 (groEL1)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AAQ61676
LNCC_Brazil: CV4014
UniProt: Q7NQX1
Position
complement(4339962..4341602)
AA seq 546 aa
MAAKDVKFGDSARSKMVAGVNILADAVKVTLGPKGRNVVLDRSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVQEGMKFVAAGMNPMDLKRGI
DKAVVSLVGEIAKIAKPCATSKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVEDG
KSLNNELDVVEGMQFDRGYLSPYFINNQDKQIAALDNPFILLFDKKISNIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLTDIAVLTGGEV
IAEEVGLTLEKATLDQLGQAKRVEVGKENTTIIDGAGEAATIQARVGEIRKQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RARATLENLKTDNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGNFGYNA
ASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDKPAAGMPDMGGMG
GMGGMM
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaagttcggtgattccgctcgcagcaagatggttgccggcgtc
aacatcctggccgacgcggtcaaggttaccctgggtcccaagggccgcaacgttgtgctg
gaccgctccttcggcgcgccgaccatcaccaaggacggcgtgtcggtggccaaggaaatc
gaactgaaggacaagttcgagaacatgggcgcccagatggtcaaggaagtggcttccaag
acctccgacgtggccggcgacggcaccaccaccgccaccgtgctggctcaggccatcgtg
caggaaggcatgaagttcgtcgccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggctgtggtgtcactggtcggcgagatcgccaagatcgccaagccctgcgcgacc
tccaaggaaatcgcccaggtaggctccatctccgccaactccgatagcgatatcggcgaa
atcatcgccaatgcgatggaaaaagtgggcaaggaaggcgtgatcaccgttgaagacggc
aagagcctgaacaacgaactggacgtggtggaaggcatgcagttcgaccgcggttacctg
tccccgtacttcatcaacaaccaggacaagcagatcgccgccctggacaatccgttcatc
ctgctgttcgacaagaagatctccaacatccgcgacctgctgccggtgctggagcaagtg
gccaagtccggccgcccgctgctgatcatcgccgaagacgtcgaaggcgaagcgctggcc
actctggtggtgaacaccattcgcggcatcctgaaggtcgtggctgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctgaccgacatcgccgtgctgaccggcggcgaagtc
atcgccgaagaagtcggcctgactctggaaaaagccacgctggaccaactgggccaggcc
aagcgcgtcgaagtgggcaaggaaaacaccaccatcatcgacggcgccggcgaagccgcc
accatccaggctcgcgtgggcgagatccgcaagcagatcgaagaagccacttccgactac
gaccgcgagaagctgcaagagcgcgtggccaagctggccggcggcgttgccgtgatcaag
gtcggcgccgccaccgaagtggaaatgaaagagaagaaggcccgcgtcgaagacgcgctg
cacgccacccgcgcagccgttgaagaaggcgtggtgcccggtggcggcgtggccctgctg
cgtgcccgcgcgacgctggaaaacctgaagaccgacaatgccgaacaggaagctggcgtg
aagatcgtgctgcgcgcgatcgaagccccgctgcgccagatcgtcaagaacgccggcgac
gagccgtcggttgtcgtgaacaaggtgctggaaggcaagggcaacttcggttacaacgcc
gccagcggcgaatacggcgacatgctggaaatgggcgtgctggatccggccaaggtgacc
cgctccgctctgcagcacgccgcttccgtggccggcctgatgctgaccaccgactgcatg
atcgccgagctgccggaagacaagccggccgctggcatgccggacatgggcggcatgggc
ggcatgggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   LNCC_BRAZIL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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