KEGG   Chlorella variabilis: CHLNCDRAFT_133050
Entry
CHLNCDRAFT_133050 CDS       T02924                                 
Name
(RefSeq) expressed protein
  KO
K14315  nucleoporin NDC1
Organism
cvr  Chlorella variabilis
Pathway
cvr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHLNCDRAFT_133050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_133050
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CHLNCDRAFT_133050
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 17359171
NCBI-ProteinID: XP_005851718
JGI: ChlNC64A_1_133050
UniProt: E1Z287
Position
Unknown
AA seq 537 aa
MAMANGLLANDVLLWKAIGAAVWAAAIAVAASGALGLMLSPATLFSPARLVGGSFSLSAW
LSATALVLAQAPAFAGAAAALRACEPRPAHLHRLLHWPRCAPASMLIGKLAARLGSVADA
ASTAAFFATHALSAALFLSVFAAAMGNAMGGARSTLQYSLWLATAYLLHWVHCSQDVLAF
PSVQRHRYFRMKQRLPRAAVQAAQLAAAAFSCAVTTSLLRSNVLGEASPGASGAPLTLGG
GTAALLAGALCTFCWLMSSAALEVVFTERLRPDDYSDRDVLRAMVACLAGKRGGLMQGLA
LHDASLLAGDVGRAALRRADMFADESGDRWKPVAVACIAELDAVSAAVGAALQQQKPAGG
AAGMPSAATQSHKWNGGLGSSKQQLDALLAVRCGYPRAAQAAQALAGFACASLKEDRFGV
LQLTQPGLGDVLLCLLGALGATQQLMRVTASLVPRQLSLGPWRGNGDAAAWAGCYSSPSV
DAAAYALQDTLTVALYRTSTTFGAGLGKVLADCTGKPAYGSASEAAALLQQFQRGQA
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggcgatggcgaatgggctgctagccaacgatgtgctgttgtggaaggccattggcgcg
gcggtgtgggcggcagccatcgccgttgccgcctcgggagccctggggctgatgctgtcc
cctgccaccctgttctcccctgctcgcctggtgggcggctcattcagcctgtccgcctgg
ctgtcagcaacagcgctggttctggcgcaagcccccgcatttgctggtgcggcggccgcg
ctgcgtgcctgcgagccgcgcccagcgcacctgcacaggctgctgcactggccacgctgc
gctcccgcctccatgctgatcggcaagctggcggcgcggctgggcagcgtggcagatgct
gcaagcaccgccgcctttttcgccacacacgctctctccgctgctctcttcctttccgtc
tttgccgccgctatgggcaacgctatgggaggtgccaggtcgaccctgcagtacagcctg
tggctggcgacggcttacctgctgcactgggtccactgcagccaggacgttctggccttc
ccatcggtgcagcgccaccgttacttccgaatgaagcagcgcctgccgagggcggcggtg
caggcggcccagctggctgccgccgccttttcctgcgctgtgaccacctcactgctgcgc
agcaatgtgctgggggaggcctcgcccggcgcctctggagcgccgctgacgctgggtggt
ggcacggcggcgctgctggccggtgccctctgcaccttttgctggcttatgagctccgca
gctctggaggtggtgtttaccgagcgcttgcgcccagatgactactcggatcgagatgtg
ctgcgcgccatggtggcctgcctggcgggcaagcggggcggtctgatgcagggcctggcg
ctgcacgatgccagcctgctggcgggcgacgtgggcagggcggcgctgcggcgggccgac
atgtttgctgacgaaagcggggacaggtggaagccagtggctgtggcgtgcattgctgag
ctggatgcggtgtcggcggccgtgggggcggcgctgcagcagcagaagccggcgggaggc
gcggccggcatgccctcggctgccactcagagtcacaagtggaacggagggctgggcagc
agcaagcagcagctggacgcgctgctggcggtgcgctgcgggtacccgcgcgccgcgcag
gcggcgcaggcgctggcgggctttgcatgcgcctcgctcaaggaagaccgctttggggtg
ctgcagctgacgcagcccggactgggcgatgtgctgctgtgcctgctaggtgcgctgggc
gccacccagcagctgatgcgcgtcaccgccagtctggtgccccgccagctcagcctgggc
ccctggaggggcaatggcgacgcggcggcctgggcaggctgctacagctctccatctgtg
gatgctgccgcgtacgcgctgcaggacacgctgaccgttgcgctgtaccgcaccagtacc
acgtttggggctgggctgggcaaggtcctggccgactgcaccggcaagcccgcgtacggg
agcgcatccgaggcggcggcgctgctgcagcagttccaacggggccaggcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system