KEGG   Chlorella variabilis: CHLNCDRAFT_139841
Entry
CHLNCDRAFT_139841 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
cvr  Chlorella variabilis
Pathway
cvr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CHLNCDRAFT_139841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cvr03009]
    CHLNCDRAFT_139841
   03016 Transfer RNA biogenesis [BR:cvr03016]
    CHLNCDRAFT_139841
   03029 Mitochondrial biogenesis [BR:cvr03029]
    CHLNCDRAFT_139841
Enzymes [BR:cvr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     CHLNCDRAFT_139841
Ribosome biogenesis [BR:cvr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     CHLNCDRAFT_139841
Transfer RNA biogenesis [BR:cvr03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    CHLNCDRAFT_139841
Mitochondrial biogenesis [BR:cvr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    CHLNCDRAFT_139841
SSDB
Motif
Pfam: POPLD POP1_N
Other DBs
NCBI-GeneID: 17351157
NCBI-ProteinID: XP_005843753
JGI: ChlNC64A_1_139841
UniProt: E1ZR18
Position
Unknown
AA seq 1001 aa
MADSWRQGQYTVQSKAGDGSKQRRSSGVCHKLEPAAGVMEQPGQLPALPRALDVQRFAGA
REQEIRALCAALKGSKLGVKFGVAALPRHLRRRAGSHKPFHNHRFRPNAKLAGKRRKLNP
VAEAGEEEGGAAAASSTTAATQGAQSGEVTTAAVARPFTNRRMRRQPAALQERFRQSAAW
TEASLAASAAAAATAGAAEASGAAAAPAAPEGISGSPRRLEMHVWHAKRLAMEERYGWLL
PGGAAGQGRGSRSFVHVTRASALMHDASYMCPLLLRGAWRDVHSVLSTLLDPVAAAALAA
DISEAGGAGGGDLGGWEQEVMLHQPGRYPQGAICPAQLLLCPASVESCSGGGAGMDVDGA
AEAAVEEGGQRAAGSGSMQALLWVHPAAAAEAAAALRAAAGAAHAAAGDPPSNHSITVSV
LDLRRLEIWGGASDAALAVALAGATAAAGGSAPQQQQQQPASLLNQQQEQQQEVEPLPSL
PPVLASMQHGEAVQLLLPDPRLRKPVVLGTLSATLLPTAAAGAEGGTAGGSSQQPQQQRL
DVPRLLRVPPPLSEPELSSRRQQLRRRLLHLEGSTLGGSAGDQQQRQQQLQEQQQERQLQ
LQGYCPAVLVRHDGQEPGAIPGWSLVLPAGWVPPFWLAAAYAGCKPTGQREWRWLHTLQQ
RRCFPWDHPDTPAYAALMRQQQRRRQAIIAKRPPGKQMLAAPPSPPDWQRLVLPPAGGSS
GSGTEAPPEQQQGMEVDAGAPADVAVELAGDVYVARCYAAMAAALSGSASGGASGGASGA
ARPVTAALRQGLLQWRPKLQAVAASADAVAGASRGGASREPSGSTSSGCLLEATVHPVKS
GSIAEGAALCYVAGREALLQRAPLTVLGGRQQRRRQRQLEQQQVALVEAGGDLDAELAFA
AAAEGLAGPSSSGSSSSCGGEVTQELVQVVGYVLSEAPRGAPRRCGALAAVQMAAAWRLR
SLQHWAPRADGGTIEAFARNPGSDTLFPVRLRLLAEGEGRR
NT seq 3006 nt   +upstreamnt  +downstreamnt
atggccgacagctggcgccaggggcaatacacagtgcagagcaaggctggcgacggcagc
aagcagcggcgctcgtccggagtctgtcacaaattagagcccgctgcaggggtgatggag
cagccgggccagcttccagcactgccccgggcgctggacgttcagaggtttgccggcgct
cgtgagcaagagatccgggcgctatgcgcggcgctcaagggcagcaagctgggcgtcaag
tttggagtggcggcgctgccgcgccaccttcggcggcgggcaggcagccacaagccgttc
cacaaccaccgcttccgtccaaatgccaagctggcgggaaaacggcgcaagctcaaccca
gtcgccgaggccggcgaggaggaaggcggagcagcagcggcgtcatcgacaacagctgca
acgcagggtgctcagtcgggcgaggtgaccacggcggctgtggcgcggcccttcacaaac
cgccgcatgcggcgccagccggcggcgctgcaggagcgcttccgccagtcggccgcgtgg
acggaagcctccctggccgccagcgccgcggctgctgccacagcaggcgcggcggaagcc
tcgggggcggcagccgcccctgcagcaccagagggcatcagcggcagcccgcggcggctg
gagatgcatgtgtggcacgccaagcgcctggcgatggaggagcggtatggctggctgctg
cccgggggcgcggcgggccagggccgcggcagccgctcctttgtgcacgttacccgcgcc
tccgccctgatgcacgatgcctcctacatgtgccccctgctgctcaggggcgcctggcgg
gacgtgcacagcgtgctcagcaccctgctggaccccgtcgccgccgcggcgctggctgcc
gacatcagtgaggcaggcggtgcgggcggcggcgacctgggcggctgggagcaggaggtt
atgctccaccagcccggacgctacccacaaggggccatctgccctgcacagctgctgctg
tgccctgccagtgtcgagagctgcagtggtggcggcgccggtatggatgttgacggggcg
gccgaggcggcggtggaggagggaggccagcgggcagcaggcagcgggagcatgcaggcg
ctgctctgggtgcaccctgccgcagcggccgaggcggctgcagctctgcgggccgcggcc
ggcgcagcccatgccgcagccggggacccccctagcaaccatagcatcactgtttccgtg
ctggatttgaggcggctagagatctggggaggggcgtcggatgcggcgctggctgtggcc
ctggcgggcgccacagccgctgctggcggcagtgcaccacagcagcagcagcagcagccg
gcttcgctgctaaatcagcagcaggaacagcagcaggaggtggagccgttgccatcgctg
ccacctgtgcttgcaagcatgcagcacggggaggccgtgcagctgctgctgccagaccct
cgcctgcgcaagccagtggtgctgggcaccctgtctgccaccctgctgccgacggctgct
gctggggccgagggagggacagcaggcggcagcagccagcagccccagcagcagcggttg
gacgtgccgcgcctgctgcgcgtgccgccgccgctgagcgagcccgagctcagcagccgg
cggcagcagctgcgccgccgcctgctgcaccttgagggctccacgcttggcggcagcgct
ggcgaccagcagcagcggcagcagcagctgcaggagcagcagcaggagcgccagctgcag
ctccagggttactgccctgctgtgctggtgcggcatgacgggcaggagcctggggctatc
ccaggctggtccctggtgctccctgccggctgggtgccgcccttctggctggctgccgcc
tatgccggctgcaagcccacaggccagcgcgagtggcgctggctgcacacgctgcagcag
cgccgctgctttccatgggaccatccagacactcccgcctatgcagcgctgatgcggcag
cagcagcggcggcgacaggccatcatcgccaagcggccgccgggcaagcagatgctggct
gcgccgcccagcccgccagactggcagcggctggtgctgcctcctgctggtggcagcagt
ggcagcggcacagaggcgccgccagagcagcagcagggcatggaggttgacgccggggcg
cctgctgatgtggcagttgagctggcaggcgacgtgtatgtggcccgctgctatgccgca
atggctgccgccctgagcggcagcgccagcggcggcgccagcggcggcgccagcggcgct
gcccgccccgtcacggctgcgctgcggcagggtctgctccaatggcggcccaagctgcaa
gctgtggccgcctccgccgacgccgtggcaggagcctctcggggcggggcgtccagggaa
ccatctggcagcaccagcagcggctgcctactggaggcaaccgtccatccagtcaagtcg
ggctcgatcgccgagggcgctgctctgtgttatgtggcgggccgcgaggcattgcttcag
cgggcgccgctgactgtgcttggtggccggcagcagcggcggcggcagcggcagctggag
cagcagcaggttgcgctggtggaggctggcggcgacctggatgctgagctggcattcgcc
gccgccgccgagggcctcgccggccccagcagcagcggcagcagcagcagctgtggcggc
gaggtgacgcaagagcttgttcaggtggtgggctatgtgttgtcagaggcgccccgcggc
gcgcccaggcgctgcggcgcgctggccgcggtgcagatggcggcggcctggcgcctgcgc
tcgctgcagcactgggcgccgcgggcagacggcggcaccatagaggcgtttgcccgcaac
cccggcagcgacacgctgttccctgtgcgcctgcggctgctggcggaaggggaaggcagg
cgttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (55)   

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