KEGG T05129: CO701

Citrobacter werkmanii: CO701_20875

Entry

CO701_20875       CDS       T05129

Symbol

trmA

Name

(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

cwe Citrobacter werkmanii

Brite

KEGG Orthology (KO) [BR:cwe00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cwe03016]
    CO701_20875 (trmA)
Enzymes [BR:cwe01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     CO701_20875 (trmA)
Transfer RNA biogenesis [BR:cwe03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    CO701_20875 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_4 MTS Methyltransf_15 Methyltransf_11 Methyltransf_31 PrmA Methyltransf_12 Cons_hypoth95 DUF3164 Ins134_P3_kin_N DREV

Other DBs

NCBI-ProteinID:

ATF51383

Position

4219947..4221047

AA seq 366 aa
MTPEHLPTEQYDAQLADKVARLQSLMTPFTDQAPEVFRSPVSHYRMRAEFRLWHDADDLY
HIMFESQTKNRLRVDSFPAASELINTLMTAMIEGVRHNHVLRHKLFQIDYLTTMSNQAVV
SMLYHKKLDDEWRQEAEALRDALRAKNLNVHLIGRATKTKIALDQDYIDERLPVAGKEII
YRQVENSFTQPNAAMNIQMLEWAIDVTKDSQGDLLELYCGNGNFSLALAQNFNRVLATEI
AKPSVAAAQYNIVANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGVDLKSYQCETIFVDP
PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHNVSRLALFDQFPYTHHMECG
VLLTKK

NT seq 1101 nt +upstreamnt +downstreamnt
atgaccccagaacacctcccgacagaacagtatgacgcgcagctagccgataaagtggct
cgtttacagagcttaatgacgccatttactgatcaggctccggaagtgtttcgctcgccg
gtcagtcattaccgcatgcgcgctgaattccgcctgtggcatgacgctgacgacctgtac
cacatcatgtttgaaagccagaccaaaaaccgtcttcgcgtcgacagctttccggcagcc
agcgaactcatcaacacgctgatgacggccatgattgaaggcgttcgtcacaatcacgtc
ctgcgtcataaattgttccagattgattacctcaccaccatgagcaatcaggcggtggta
tccatgctgtaccataaaaagttagatgacgaatggcgtcaggaagccgaagcactgcgg
gatgcgctacgcgcgaaaaacctgaatgtgcatctgattggccgggcgaccaaaaccaaa
atcgcgttggatcaagattacatcgatgaacgtttgccggttgcgggtaaagagattatc
taccgccaggttgagaacagcttcacgcagccgaatgccgccatgaacattcagatgctg
gaatgggcgattgatgtcaccaaagattcgcagggcgacctgcttgaattgtactgtggc
aatggcaacttctcgttagcgctggcgcagaatttcaaccgcgtactggccactgaaatc
gccaaaccgtccgtggctgccgcgcagtacaatattgtggctaaccatattgataacgtg
caaattattcgtatggctgctgaagagtttactcaggcgatgaacggggtgcgcgagttc
aaccgcttacagggcgtcgacctgaagagttaccagtgtgaaaccatttttgttgatcca
ccgcgcagcggcctggacagcgaaacagagaagatggtgcaagcgtatccgcgtattctg
tacatctcctgcaacccggagacactgtgtaagaacctggaaacgttgagccagacgcac
aatgtgtcacgtctggcgctgttcgatcagttcccgtatacacaccacatggagtgcggc
gtactgttaacgaagaagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system