KEGG   Cyanobium sp. NIES-981: CBM981_0585
Entry
CBM981_0585       CDS       T04888                                 
Name
(GenBank) Exoribonuclease, VacB/RNB family protein
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
cyi  Cyanobium sp. NIES-981
Brite
KEGG Orthology (KO) [BR:cyi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cyi03016]
    CBM981_0585
Enzymes [BR:cyi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CBM981_0585
Transfer RNA biogenesis [BR:cyi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CBM981_0585
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: SBO42296
UniProt: A0A182AKE3
Position
I:499215..501209
AA seq 664 aa
MKDERGSHLAVVLQDHGSKLDLSVGFQHRHQQLPRRTATLLVPFTDGGDPPVRLGLPPWT
FTDQDLAEALPPRRDFAAAWLLLADGDQAWALPEWVELVCSRSDPAALAACWLWLHGSQL
LFRLRHQGISARSPDDLRRLRREQHRLALDQRSQRQWHEALRRREPLRRSSLGPQQEREL
DLLLAVAAGQDATDLPVPLRRALQAAHCPADSGGVRHLLVDLGQWDPHHLPSLHATTWET
GFSAELEAEAQRLIAQASEARPGDDDRLDLTAQHCVTIDDADTRDIDDALGLERCPDGAL
RLWIHIADPGRLVAVDSPLDLEARRRGSSLYLASGTLPMFPEALATGPLSLGAGRRNAAW
SLAVVLDPEGAVTTFRLVRSWVRPTYRLSYADADELIDLAPPEDPDLADLHALLNRRRRW
RTARGAILMDQPEGRIRVRDGQPELELTEPSAARLMVAEAMILAGAVVAAYGEEHHLALP
YRSQMPAELPRPAELEALPAGPVRHAAIKRCLSRGHTGATPRAHFTLGLPAYVQATSPIR
RYGDLVAQRQLLALQQGQTPLDADALQALLQEIEDPIRQGLQISREDQRHWQQEWFSRQG
ACQWQGQFLRWLRAQDQLGLVHLEELAMDLAALCPAGSEPGDALIVRVQLVDPLRDQLRL
IASS
NT seq 1995 nt   +upstreamnt  +downstreamnt
gtgaaggacgagcgcggttcccatctggcggtggtgctgcaggaccatggctcgaagctc
gacctctccgtcgggtttcagcacagacatcagcagctgccccggcgcacggccaccctg
ctcgttcccttcaccgatggcggcgacccgcccgtcaggctgggcctgcctccctggacc
ttcacggaccaggatctggcggaagccctgcccccccggcgggacttcgccgccgcctgg
ctcctgctcgccgatggcgaccaggcctgggccttgccggagtgggtggagctggtgtgc
agccgcagcgatcccgcagcgctggcggcctgctggctgtggctgcatggctcccagctc
ctgttccgtctgcgtcatcagggcatcagcgcccgctctcccgacgacctgcggcgactg
cggcgtgagcagcaccgtctggcgctcgatcagcggagccagcggcagtggcatgaggcc
ctcaggcgccgggaaccgctgcggcgttcctcgctcggcccccagcaggagcgggagctg
gatctgctcctggccgtggcggccggccaggatgccacggacctgccagtgccgctgcgc
cgggcgctccaggccgcccactgcccagcggacagcggtggcgtccgccacctgctggtg
gatctgggccagtgggatccccatcacctcccctccctgcacgccaccacctgggagacg
ggcttcagcgccgagctggaggcggaggcccagcggctgatcgcccaggcctccgaggcg
cggcctggggatgacgatcgcctcgacctcaccgcccagcattgcgtcacgatcgatgac
gccgacacccgggacatcgacgatgccctcgggctggagcgttgtccggacggcgcgctc
cgcctgtggatccacatcgccgatccgggccgtctggtggccgtggattcgcccctggat
ctggaggcccggcggcggggcagcagcctctatctcgccagcggaaccctgccgatgttc
cctgaggcgctggccaccgggcccctcagcctcggcgccggacggcgcaacgcggcctgg
agcctggcggtggttctcgatcccgagggggccgtcaccacgttccggctggtgcgcagc
tgggtgcgtcccacctaccgcctcagttacgccgatgccgatgagctgatcgatctggcc
ccacccgaggatccggatctcgccgatctgcatgccctgctgaaccggcgtcgccgctgg
cggactgcccggggggccattctgatggaccagcccgagggcaggatccgcgtgcgggat
ggccagcccgaactggagctgaccgaaccgagtgcggcacgcctgatggtggccgaggcc
atgatcctggccggcgcggtggtggccgcctacggagaggagcaccacctggccctgcct
taccgcagccagatgcccgccgagctgccgcgaccagccgaactggaggcgctgcccgca
ggcccggtgcgccatgccgccatcaagcgctgcctcagccgcggccataccggggcgacg
ccccgggcccatttcactctggggttgccggcctacgtgcaggccacctcaccgatccgc
cgctatggcgacctggtggcccagcgtcagctgctggccctgcagcagggccagaccccc
ctggatgccgatgccctgcaggccctgctgcaggagatcgaggatccgatccgccagggc
ctgcagatcagccgggaggatcagcggcactggcagcaggagtggttctccaggcaaggg
gcgtgccagtggcagggccagttcctgcggtggttgcgggcccaggaccagctcggattg
gtgcatctcgaggagctggccatggatctggcggccctctgtccggcggggtccgagcct
ggagatgccctgatcgtgcgcgtgcagctggtggatcccctgcgggatcagctgcgcctg
atcgcctcctcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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