KEGG   Rippkaea orientalis PCC 8801: PCC8801_3669
Entry
PCC8801_3669      CDS       T00806                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
cyp  Rippkaea orientalis PCC 8801
Pathway
cyp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cyp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCC8801_3669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyp03400]
    PCC8801_3669
DNA repair and recombination proteins [BR:cyp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PCC8801_3669
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PCC8801_3669
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 Helicase_C_2 HEM4 AAA_22 P-loop_SecA UB2H HerA_C AAA_16 TerL_nuclease
Other DBs
NCBI-ProteinID: ACK67631
UniProt: B7K2T0
Position
complement(3831501..3833504)
AA seq 667 aa
MTFSSFRLQAPFEPQGDQPQAIAQLLASLQAGNRFQTLLGATGTGKTFSIASVIEKVGKP
TLVLAHNKTLAAQLCNELRQFFPDNAVEYFISYYDYYQPEAYIPVSDTYIEKSSSINDEI
DMLRHSATRSLFERKDVIVVASISCIYGLGMPSEYLKAAVPLEVGQEVDQRNLLRELVGI
QYSRNDIELQRGRFRVKGDVLEIVPAYEDRIIRVEFFGDEIEAIRYLDPVTGEILQSLKM
VNIYPARHFVTPDEQIEIACQQIKVELEEQIEALEKEGKLLEAQRISQRTRYDLDLLQEV
GYCNGVENYSRYLAGRKAGEPPECLIDYFPQDWLLVVDESHVTVPQLRGMYNGDRSRKQV
LIDHGFRLPSAADNRPLKSEEFWTKVNQCIFVSATPGDWEIEQSGDRIIEQIIRPTGVLD
PEIFVRPTEGQVDDLLGEIKQRVKRQERVLITTLTKRMSEDLTEYLSERGVKVQYLHSEV
KSIERIEILQSLRKGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIG
RAARHVNGQAILYADNLTKSMIKAIEETERRRGIQMAHNKINNITPKPIIKKETNSILSF
LDISRRLNSQQLEEIYEKSDDLPLEKVPELIQQLENQMKEAAQKLEFEEAAKYRDRIKNL
RDKLLGN
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgacatttagctcttttcgtttgcaagccccctttgaaccccaaggtgatcaaccccaa
gcgatcgcccaattattggcttctctccaagctggaaaccgctttcaaacgttattaggg
gcaacaggaacggggaaaaccttctctattgcttctgtgatcgaaaaggtgggtaagcca
accctcgtcttagcccataataaaacattggcggcgcaattgtgtaacgaattacgacaa
tttttccccgataatgcggtggaatattttattagttattacgattattatcaaccggaa
gcctatattcctgttagtgatacttatattgagaaaagttcgtccatcaacgacgaaatt
gatatgttacgtcactcggcaacccgttcgttatttgaacgaaaagatgtgattgttgtt
gcctctattagttgtatttatggcttaggaatgccctcagaatatctcaaagcagccgtt
cctttagaagtgggtcaagaagttgatcaacggaacttattacgcgagttagtcgggata
caatattctcgcaatgatattgaattacaacggggtagatttcgggttaaaggtgatgtt
ttggaaatcgttccagcttatgaagatcgtattattcgggtcgaattttttggcgatgaa
attgaggccattcgctacctcgatcccgttacgggagaaattctccaaagtcttaaaatg
gttaatatttatcccgcccgtcactttgttacccccgatgaacaaatcgagattgcttgt
caacaaattaaggttgaattagaagaacaaattgaagccctagaaaaagagggaaaatta
ttagaagcgcaacggattagtcaacgaacccgctacgatttggacttattacaagaggtg
ggttattgtaatggagtagagaattattcccgttatttagccggaagaaaagcgggggaa
cctcctgaatgtttgattgattatttccctcaagattggctattagtcgtggatgaatcc
catgttaccgtgccccaattacggggaatgtataacggcgatcgctcccgtaaacaagtg
ttaattgaccatgggtttcgtttacccagtgctgccgataaccgtcctttaaaatcggaa
gaattttggactaaagtcaatcaatgtatctttgtttcggcaacccctggtgactgggaa
attgaacaatctggcgatagaattattgagcaaattattcgacccacaggagtattagat
cctgagatttttgtccgtccaaccgagggacaagtggatgatttattaggggaaattaaa
caaagagttaaacgacaagaacgggttttaattactactttgaccaagcggatgtctgag
gatttaacagaatatttgagtgagcgaggggtgaaggttcaatatctccattctgaagta
aaatccattgaacgaattgagattttacagtccttaagaaaaggggaatttgatgtctta
attggggtcaatttattgcgagaaggattggatttacccgaagtttctttagtggctatt
ttagatgccgataaggagggatttttaagggcagaacgttctttaattcaaactattgga
cgcgcagcacgtcatgttaacggacaggctattttatatgctgacaatttaaccaaaagt
atgattaaagcaatagaagaaaccgagagaaggcggggtattcaaatggctcataataag
ataaataatattacgccaaaaccaattattaaaaaagaaactaattcgattttatctttt
ctcgatatttcacgccgtctcaactctcaacaactcgaagaaatttatgaaaaatccgat
gatttacccttagaaaaagttcccgaattaattcaacaattagagaaccaaatgaaagag
gctgctcaaaaattagaatttgaagaagcggcaaaatatcgagatagaattaaaaattta
cgcgataaattattaggaaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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