KEGG   Candidatus Atelocyanobacterium thalassa: UCYN_10000
Entry
UCYN_10000        CDS       T01159                                 
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cyu  Candidatus Atelocyanobacterium thalassa
Pathway
cyu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    UCYN_10000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyu03400]
    UCYN_10000
Enzymes [BR:cyu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UCYN_10000
DNA repair and recombination proteins [BR:cyu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     UCYN_10000
    RecFOR pathway proteins
     UCYN_10000
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_14 nSTAND3 Rad17 AAA_3 Mg_chelatase AAA_22 TIP49 AAA_18 AAA_16 TsaE Sigma54_activ_2 AAA_24 Imm64 NB-ARC AAA_25 RPAP3_C RNA_helicase
Other DBs
NCBI-ProteinID: ADB95675
UniProt: D3EQC5
Position
1142179..1143237
AA seq 352 aa
MIIKRNKTPQDRTNKNTSKEYKRDLSNIQKNEEKNYLIDDIRPNSFKEYIGQKDLKNVLD
IIIKAAKLREEPIDHLLLYGPPGLGKTTISLILASEMGVDCKITSAPSLEKPKDIIGLLV
KLKPGDVLFIDEIHRLNHLTEEILYPVMEDYRLDITIGKGQLTKISSISLPKFTLIGATT
KIGSISFPLRDRFGLVQRLKYYEYHELALIIKRSALVLKTPITDEGANEIAIRSRGTPRI
ANRLLKRIRDYMQVKQMNLITKDLAIDALNLYKIDSRGLNWTDHLILETMIFQFNGGPVG
LEAIAASTGEDIKTIKEVYEPYLLQIGYINRTPRGRVVTEAAYKYIETIKRE
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgatcatcaaacgtaataaaacacctcaagatagaactaataaaaatacttcaaaagag
tacaaaagagatctatctaatattcaaaaaaatgaagaaaaaaattatttaatagatgat
attcgtccaaattcttttaaagagtatattgggcaaaaagatctaaagaatgtactagac
attattattaaagctgctaagttgcgagaagaaccaattgatcacttgctcttatatggc
ccacctggacttggaaaaacaactatctctttgatattagcatcagagatgggagttgat
tgtaaaattacttctgcaccatctctagaaaagcccaaagatataattggacttttagta
aaattaaagcctggagacgttttgtttattgacgaaattcatcgattaaatcatttaact
gaagaaatattatatccagtgatggaagactatcgtcttgatatcacaattggcaaagga
caactaactaaaataagcagtatctctttaccgaaatttactttaatcggagctactact
aaaattggcagtatatctttccctttaagagatcgttttggattagttcaacgtttaaag
tattatgagtatcatgaattagctttaattattaagcgtagcgccttagtcttaaaaact
ccaattactgatgaaggagcaaatgaaattgctatccgctctagaggaactcctagaatt
gctaatcgcttgctaaaaagaattagagactatatgcaagttaaacaaatgaatcttatt
acaaaagatctagctatagatgctttaaatttatacaaaatagattctagaggattaaat
tggactgaccatctaattttagaaactatgatttttcaatttaatggagggcctgtcggt
ttagaggctattgctgcatccactggagaagatataaaaactattaaagaggtttatgaa
ccatacttgctacaaattggttatataaatcgtacaccaagagggagagtcgttacagaa
gcagcatataaatatatagagacaataaagagagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (42)   

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