KEGG   Desulforapulum autotrophicum: HRM2_05340
Entry
HRM2_05340        CDS       T00861                                 
Symbol
priA
Name
(GenBank) PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
dat  Desulforapulum autotrophicum
Pathway
dat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HRM2_05340 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dat03400]
    HRM2_05340 (priA)
Enzymes [BR:dat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HRM2_05340 (priA)
DNA repair and recombination proteins [BR:dat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HRM2_05340 (priA)
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR Penicillinase_R SLFN-g3_helicase AAA_19 Zeta_toxin TrwB_AAD_bind AAA_30
Other DBs
NCBI-ProteinID: ACN13648
UniProt: C0QHU0
Position
607284..609731
AA seq 815 aa
MENQNFIEIAVALPVHGTFTYTLPLDLAAEAIPGMRVLVPFGNRRVTGYVLGPGHENTEF
KAKPIQGLLDEAPLFPPAMIELFRWVSDYYIHPLGEVIKAALPKGLNRYDVSFLSLVEKP
GNLPDLPDLPDLSPREQAVVDLLKKKGSVSVKSLVGRGKNPSVSALVRRLIQKGVIQQAA
RLKKDQIQMKTEKFILPTGQGEPMERMSAKRRQILEIVREKGEISLTLLKQEVPTAPKLV
KILAGAGYLEVIERQVFRDPLGDPVDPDVPPELMDEQAGVVNQVISEMDKGFSRYLLSGV
TGSGKTEVYLRLVTEAMDRGQGALVLVPEISLISQTERRFRARFGKKIAVLHSGLTMGER
LDQWNRIMTGDAVIVIGVRSSVFAPINNLGIIIVDEEHDTSYKQETGLRYNARDIAVVRA
KIENIPVVLGSATPSVQSYYNVCEGRFKELKLTKRVNCHPLPEIELVDLKRYKDFRGIER
IITPELSRGIGHCLERGEQALIFLNRRGFATYPVCQACNEPVKCKFCDLTMTLHMDTNEF
RCHLCGFSMSMNQPCPNCNARRIKPLGFGTERIENMLQVLFPDARVARLDQDTGSKKGAM
VSILKKVKHRTVDIIIGTQMLAKGHDFPFITLVGVICADLSLNFPDFRAGERTFQLLAQV
AGRAGRGDRKGRVVMQTYNPEHFSIEASKNQDFVEFYHKEIPFRKGLGYPPVSRIIQLKI
SGLDKDKVKVHALFVGEECKRLVDQDRENGHLVQILGPIEAGIPKIAMRYRWQILLKSPR
ATLLNRLVRAMLAEKKVFANREVTVGIDVDPYSMS
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggaaaatcagaattttatcgagattgccgttgcccttcctgtccatggcacttttacc
tatacccttcctttggatcttgctgccgaggcaattccgggtatgcgggtgctggttccc
tttgggaatagaagggttacgggctatgtccttggcccgggccatgaaaacactgaattt
aaggcaaaacccatccagggacttctggatgaggcccccctttttcctccggccatgatc
gaattgttcagatgggtgtctgactactacatccatcccctgggtgaggtgatcaaggct
gcacttccaaaggggctgaaccggtatgacgtttcgtttctctcccttgttgaaaaacct
ggaaacctgcctgacctgcctgacctgcctgatctctcgcccagagaacaggccgttgtg
gatctgttgaaaaaaaaaggatctgtctcggtgaagagtcttgtgggacggggtaagaac
ccatctgtttcggcccttgtcaggcgattgatccagaagggtgtgatccagcaggcggca
cggttgaaaaaagatcagatccagatgaagactgagaaatttatcctgcccaccggacag
ggggagcccatggagcggatgtctgccaaacgcaggcagatcctggagattgtccgtgaa
aagggcgaaatctccctgacccttctcaagcaggaggtgcccacggccccgaagcttgtg
aagattcttgccggggcaggctaccttgaagtcatcgagcgtcaggtgttcagggacccc
ctgggggacccggtggatcccgacgtgccccctgagttgatggacgagcaggcaggggtt
gtgaaccaggtgatctcggagatggacaagggattttcccggtatctgctttcgggtgtt
acgggcagtggcaagaccgaggtctacctgcgccttgtgaccgaggccatggacaggggg
cagggtgccctggtgcttgtgccggagatttccctgatttcccagaccgaacggcgtttt
cgggcaagatttggcaaaaagatcgctgtgctccacagtggcctgaccatgggggaacgc
cttgaccagtggaaccggatcatgaccggggatgccgtcattgtcatcggggttcggtcg
tcggtgtttgctcccatcaacaatctgggtatcatcattgtggatgaggagcacgatacc
tcctacaagcaggagaccggccttcgctacaacgcccgggacattgccgtggttcgggcc
aaaattgagaacatccctgtggtcctggggtcggcaaccccgtctgtgcaatcctattac
aatgtgtgcgagggaagattcaaggaactcaagctgacaaaacgggtcaactgccatccc
ctgcctgagatagagcttgtggacctcaagcgctacaaggacttcaggggtatagagcgg
atcattactcccgaactttcaagggggatcggccattgccttgagcgtggagagcaggcc
ctgatttttctgaaccgtcgggggtttgccacctatcccgtgtgccaggcgtgtaatgag
ccggtgaagtgcaaattttgcgatctgaccatgacactgcacatggacacaaacgaattc
cgctgccatttgtgcggattttccatgtccatgaatcagccctgtcccaattgtaatgcc
cgacggatcaaacccctggggtttggcaccgagcgtattgaaaacatgcttcaggttctt
tttccggacgcaagggtggcaaggcttgaccaggatactggctctaaaaagggggccatg
gtttccattctgaaaaaggtgaagcatcgaaccgtggatataatcatcggcacccagatg
cttgccaagggccatgattttccgtttatcaccctggtgggggtgatctgtgcagatctt
tcgcttaattttcccgatttcagggcaggagagaggacctttcagctcctggcccaggtg
gcgggaagggccgggcggggggatcgaaaggggcgggtggtcatgcagacctacaatcct
gaacatttcagcattgaggcgtccaaaaatcaggactttgtcgaattctaccataaggaa
atcccttttagaaaggggcttggctatccaccggtctccaggattattcagctgaaaatt
tcgggactcgataaggacaaggttaaggtacatgccctctttgtgggcgaagagtgcaag
cgcctggttgaccaggaccgtgaaaatggtcatctggttcagatcctcggccctattgag
gcgggtattccaaagatcgccatgcgctaccggtggcagatcctgttgaaaagtccccgg
gcaaccctgttgaacaggcttgtccgggccatgctggccgagaaaaaggtttttgccaac
agggaggttactgttggaattgatgtggacccctattccatgagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system