KEGG   Desulfarculus baarsii: Deba_3289
Entry
Deba_3289         CDS       T01284                                 
Name
(GenBank) seryl-tRNA synthetase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
dbr  Desulfarculus baarsii
Pathway
dbr00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dbr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Deba_3289
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dbr01007]
    Deba_3289
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dbr03016]
    Deba_3289
Enzymes [BR:dbr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     Deba_3289
Amino acid related enzymes [BR:dbr01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   Deba_3289
Transfer RNA biogenesis [BR:dbr03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Deba_3289
 Prokaryotic type
    Deba_3289
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N TMF_DNA_bd PKcGMP_CC GAS APG6_N DUF5082 ERM_helical Angiomotin_C
Other DBs
NCBI-ProteinID: ADK86642
UniProt: E1QM57
Position
complement(3638139..3639419)
AA seq 426 aa
MLDLKFVRENFDLVQRSIAQRNGKVDLETYGRLDERRRQVLPELESLRSTRNDVSAQVAR
LKKAGEDASGLFEQMKDVGARIKDLEAELAQVEQELGQLMLTIPNLPHQSTPVGKGEEDN
PVVSVWGQPPVFDFEPLNHWDIGVNLDIIDFERAVRMAGSRFAVMKGAGARLERALIGLM
LDTHTTAHGYTEILPPLMVNTRALTGTGQLPKFAEDSFKVEGADYWLIPTAEVPLTNLHM
DEVLDGDKLPLCYTAYTPCFRAEAGSHGKDVRGLIRLHQFDKVELVRICRPEDSYENLEV
LTGHAEAILRLLGLPYRKIVLCTGDLGFSAAKTYDLEVWLPGQNRYREISSCSNCEAFQA
RRAGIRFKDKGRKGTTLAHTLNGSGLAVGRALVAILENYQQADGSVKIPEALLPYMGGQQ
TIKAAE
NT seq 1281 nt   +upstreamnt  +downstreamnt
gtgctggatctcaaattcgtccgcgaaaatttcgacttggtgcaaagatccattgcccag
cgcaacggcaaggtcgacctggagacctatggccgcctcgacgagcgccgtcgccaggtt
ctgcccgagctggagagcctgcgctcgacgcgcaacgacgtcagcgcccaggtggcgcgc
ctgaaaaaggccggcgaggacgcctccggccttttcgaacaaatgaaagacgtgggcgcg
cgcatcaaggatctggaggccgagttggcccaggtcgagcaggagctgggccagttgatg
ctgaccatccccaacctgccccaccagagcacgcccgtgggcaagggcgaggaggacaac
cccgtcgtctcggtctggggccagccgcctgtttttgatttcgagccgctcaaccactgg
gacatcggcgtgaacctggacatcatcgacttcgagcgggccgtgcgcatggccggatcg
cgtttcgcggtgatgaagggggccggcgcgcgtctggagcgggcgctgatcggcctgatg
ctagacacccacacgaccgcccacggttacaccgagattttgccgccgctgatggtcaac
acccgggcgctgaccggcaccggccagttgcccaagttcgccgaggactccttcaaggtg
gagggcgcggactattggttgatccccaccgccgaggtgcctctgaccaacctgcacatg
gacgaggttctcgacggcgacaagctgcccttgtgctacacggcctacacgccctgcttc
cgggccgaggccggcagccacggcaaagacgtgcgcggcttgatccgcctgcatcagttc
gacaaagtggagttggtgcgcatctgccggcccgaggacagctacgaaaacctggaggtg
ctgaccggccacgccgaggcgattttgcgccttttgggcctgccctatcgcaagatcgtc
ctttgcaccggcgatctgggcttttcggcggccaagacctacgacctggaggtctggctg
cccggccaaaaccgctaccgcgagatcagttcgtgcagcaactgcgaggccttccaggct
cggcgggcgggcattcgcttcaaggacaagggccgcaaagggaccaccctggcccacacg
ctcaatggatcgggcctggcggtgggccgggcgctggtggctatcctggaaaattatcag
caggctgacggctcggtgaagattcccgaggcgcttttgccctacatgggcggacagcaa
accatcaaagccgcggagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (39)   

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