KEGG   Dendrobium catenatum: 110098903
Entry
110098903         CDS       T05027                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
dct  Dendrobium catenatum
Pathway
dct03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110098903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dct03019]
    110098903
   03036 Chromosome and associated proteins [BR:dct03036]
    110098903
Enzymes [BR:dct01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110098903
Messenger RNA biogenesis [BR:dct03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110098903
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     110098903
Chromosome and associated proteins [BR:dct03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    110098903
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 TFIIA
Other DBs
NCBI-GeneID: 110098903
NCBI-ProteinID: XP_020681511
Position
Unknown
AA seq 422 aa
MNPRGRYPPGIGNGRGGGAGPNPNFYPRGPQPQQQYVQRNPLPSQQNQIYHNQQQQQQRY
QQWLKRNESNSGAGELVKSVTTQGSDSSSQDWKTQLRVPPPDTRYKTEDVTATKGNDFED
YFLKRELLMGIYEKGFEKPSPIQEESIPIALTGVDILARAKNGTGKTAAFCIPALEKIDQ
EKNVIQVVILVPTRELALQTSQVCKELGKHLKVQVMVTTGGTSLKDDIMRLYQPVHLLVG
TPGRILDLAKKDICVLKDCSMLIMDEADKLLSSEFQPSIGQLIRFLPANRQILLFSATFP
VTVKDFMDRYLRKPFIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFC
NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTGITLYSVDLI
RV
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaccctagaggaaggtatccccctggtattggaaacggccgcggtggtggcgctggc
ccaaaccctaatttctatccaagagggccgcagccgcagcagcagtacgtgcagagaaat
cccttaccaagccagcagaatcaaatataccacaaccagcagcagcagcagcagcgctat
cagcaatggctaaagcggaatgaaagcaattccggtgctggcgagttggtgaaatcagtc
accactcaaggcagtgattccagttcccaagattggaagacgcagttgagagtgccacct
ccagatacgcgctacaagacagaggatgtaactgcaactaaaggaaatgactttgaagat
tattttctgaagagggagctacttatgggaatatacgagaaaggatttgaaaaaccttca
cctattcaggaagaaagcatcccaattgctctaaccggagttgacattctggctagagct
aaaaatggaaccggaaaaactgctgccttctgcattccagcattagaaaaaattgatcaa
gaaaagaacgttattcaagttgtcatattggttcctacaagggaattggctcttcaaaca
tctcaggtttgcaaggagctcgggaagcacttgaaggttcaggtaatggtaactactgga
ggaactagcttgaaagatgacatcatgcgcttgtatcaacctgtccacttgctcgttgga
acacccggtcgaatcctagatctcgcaaagaaggatatttgtgttctgaaagattgttcg
atgctcattatggatgaggctgacaagcttctatcttctgaattccaaccgtcaattgga
caactaattcgctttcttcctgcaaatagacaaatattgttgttttcagccacgtttcct
gttactgtcaaggatttcatggacagatatctgagaaaacccttcataatcaacctaatg
gatgaactgactctcaagggaataacacaatattatgcttttgtcgaagaaaggcagaaa
gtgcattgcctaaatacacttttctcaaagctacaaatcaaccaatctattatattctgt
aactctgtcaaccgggtagaattattggcaaagaaaatcactgagcttggttactcatgc
ttctacatccatgcaaaaatgttgcaagatcatagaaatcgtgtttttcatgactttcgc
aatggcgcatgcagaaatcttgtctgtacaggtataactttgtattctgttgacttgatt
cgagtataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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